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L2_022_000M1_scaffold_380_4

Organism: dasL2_022_000M1_concoct_4_fa

near complete RP 50 / 55 BSCG 49 / 51 MC: 1 ASCG 13 / 38
Location: 5387..8872

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 1156.0
  • Bit_score: 2243
  • Evalue 0.0
transcription-repair coupling factor (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 93.6
  • Coverage: 1158.0
  • Bit_score: 2155
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZF62_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 1156.0
  • Bit_score: 2243
  • Evalue 0.0

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Taxonomy

Faecalibacterium prausnitzii → Faecalibacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3486
ATGTACGAAGCCTTGCTCAAGGCCACACCGGAATATCAGAAGATCGCCGCCAGCTTTGCAAAGCCCGGCCCTGCCGCGCTGTTCGGTCTGCCGCCCGCAGGCTGTGCCCTGCTGTACGCCGCGCTGCAAAAAGACCTTGGTCGGGTGCTGTGCATCGTGACCCCCGGCGAGGCCGAGGCCACCCACTTTGCGGACGACCTCAAGGCGTTGGGCCTTTCTGCCGCCGTGTTCCCGCCCCGGGATTTCATGCTGCGCCCGGTGGAGGGCGCGGGCCGCGAGTACGAGTACCGCCGCCTTTCGGTGCTGGGCTCCCTTGCAGGCGGGCGGCTGAACGCGGTCTGCGTGCCCGCCGAAGCGCTGTTGCAGTACACCGTGCCCCGGGATGAATTTTTAAAGAACACTCTTACCCTCAAACCCGGCATGGTGTACAACCGCGAGGGTCTTGTGGACCGGCTGTTCGCCGCCGGGTATGTGCGGCGCGGTCAGGTGGACGGCCCGGGACAGTTCAGCGTGCGCGGCGATATCGTAGATATCTATGCGCCGGATATGCGCCAGCCCGCCCGCGTGGAATACTGGGACGATGAGATCGATTCCATTTCCTCCTTCGACCTGCTCACCCAGCGGCGGGACAGCGCACTGGAAAAGATCTATCTTTCCCCTGCCCGCGAGGTGCTGTTCGGCGATACCGCCGAGACCGCCGAGGCCCTGCGTTCCGCCATCAAAAAGGCGCGCGGCCGGCACCGCACCGCACTGGAAAAGGCCACGGAAGCCGACCTTGCTCAGCTGGACTCCGGCCTGATGCCGGAAGCCATGGATAAATACTACGGCCTGCGCTATCCGAGCCCGGCCACCCTGCTGGATCATCTGGACACACCGCTGTTCATTCTGGACGAGGTGGGCGGCATCCGGGACGCCCAGAAGGCCACCGAGTTCCGCCGCAGCGAGGAACTGACCGGCCTGCTGGAGGAGGGCGTGCTCTGCCCCGGGCTGGATGTGCTCTACCAGACCATGGACGACCTTGCCGCTGCCGCCCAGAAGCAGAGCACCCTGCTGTGCGAGAACTTTCTGCGCGGCATGAACGAGTTCAAACTGAAAGATCTCATCAACGCCGAAGCCTTTTCCGCTCCCAACTGGAACGGCGACCTTGCTTCCCTGCGGGAGGATCTGGCCCCCCTTATTGCGCAGGGCTATGCCGTCACCCTGTTCTCCGGCACCCCCAAGGATGCCGCTGCCCTCACCCGCGACCTTGCCGACAAGGGCTACTCCGTGAGCATGAGCCGGGATGTGCGGCCCACAAAAGGCATCGTGCAGGTGCTGCCGGGTCATCTGACCGCCGGGTGCACCTTCCCGTTTGCCCATGCGGCGGTGCTGTCCAGCCGTCGGCACGGTCTGGAGGAAGAGACCGCCGCCGAGACCAAAAAGCGCAAAAAGAACAAGAATGCCCTTTCCAGCCTTTCGGACATCAAGCCCGGGGACTATGTGGTGCACCAGAGCCACGGCATCGGCATGTATGCGGGCATCCAGCGGCTGGAAGTGCAGGGCGCCACGAAAGATTACCTCAAGGTACAGTATTCCGGCTCGGACGTGCTGTACGTACCGGTGACCCAGCTGGACCTGCTGAGCCGCTACACCGCCCCCGGCGACGAGGAAAAGGTAAAGCTGGCAAAGCTGGGCGGTGCCGAGTGGCAGCGCACCCGCGCCAAGGTGAAAAAAGCCACCGAGGAAATGGCGCAGGAGCTCATTGAGCTGTACGCCCGCCGCCGTCAGGCCACGGGCTACGCATTCCCGCCGGACGGCGACTGGCAGCGGGACTTTGAGACCCGCTTTGACTACGACGAGACCGACGACCAGCTGAACGCCACCGCCGAGATCAAGCAGGACATGGAAAAGGGCTGGCCCATGGACCGCCTGCTGTGCGGCGACGTGGGCGTGGGCAAGACCGAAGTGGCCCTGCGCGCCGCCTTCAAGTGCGTGATGGGCGGCAAGCAGTGTGCCATCCTTGCCCCCACCACCCTGCTGGCGTGGCAGCACTACAACACCATCCTCTCCCGCATGGAAGCCTTCCCGGTGAAGGTGGAGATGATGTCCCGCTTCCGCACCGCAAAACAGCAGAAGGAGACTCTCCGGGGCCTGCAGTCGGGCAGTGTGGATATCGTGGTGGGCACCCACCGGCTGCTGTCCAAGGACGTGAAGTTCCATGACCTCGGCCTTGTCATCATCGATGAGGAGCAGCGCTTCGGCGTCAAGCACAAGGAAAAGCTCAAGGAGAACTTCATCGGGGTGGACATGCTCACCCTGTCGGCCACTCCCATCCCCCGCACCCTGAACATGGCCATGAGCGGCATCCGGGACCTTTCCACCATCGAACAGCCGCCCATCGAGCGGCAGCCCGTGGAGACCTTTGTGCTGGAATACAACGACGTCATCCTTGCCGAGGCCATGAAGAAAGAGCTTGCCCGGGGCGGGCAGGTGTACTACCTGCACAACCGGGTGGACAACATCGAAGCCTGCGCCGCCCATGTGAGCAAGCTGGTGCCCGGCGCACGCATCGGCATTGCCCACGGCAAGATGACCGAGGAAGAGCTGAACCCCGTGTGGCAGCATCTGCTGAACGGCGAGATCGATATTCTGGTGTGCACCACCCTCATCGAGACCGGCATCGATGTGCGCAACTGCAACACCCTCATCATCGAGGACGCCGACCGCATGGGCCTTGCCCAGCTGTACCAGATCAGAGGCCGAGTGGGCCGCTCCGGCCGCAAAGCCTATGCCTATTTCACCTTCCGGCGGGACAAGACCCTGACCGACATCGCCCAGAAGCGGCTCTCCGCTATCCGGGAGTTCACGGCCTTCGGCTCCGGCTTCCGCATCGCCATGCGGGATCTGCAGATCCGCGGTGCGGGCAGTCTTCTGGGCCACAGCCAGCACGGCCACATGGAGGCCGTGGGCTACGACCTCTACGTGAAGATGCTGGGGCAGGCCATCGCCCGGGCCAAGGGCGAACCTGTCCGGCGGGACAAGAGCGAATGTCTTGTGGACCTGCGGGTGGATGCCTTCATCCCGGAGAAATATATCGCAGACGGCCCGGGCCGCATTGAAGCTTATAAGCGCATTGCCGCCATCCAGACGGCAGAGGATGCCGCCGATGTGCTGGACGAGCTCATCGACCGCTACGGCGACCCGCCGCCCTCGGTGAGCGATCTGGTGAACGTGTCACTGGTGCGCGTGCAGGCCAGCGCTGTGGGCGTGACCGAAGTGACCCAGAAAAAGGACACCCTCACCCTGCAGCTGGAAAGTCTGGATCTGCCCATGATCCGGGGCCTGCTGGTAGCCTTCAACGGCCGCGTCACCGCCGGTGCAGGCAACCGGCCCTATCTTTCTGTCACCCTGCAGCCCGACGAAAAGCCGCTGGAGCTGCTGCAGAGCATCCTCAAGGCGATGGCGGAGATCCTGAATGGCGGAGAAAAAGCAAAAGACAGCAAATGA
PROTEIN sequence
Length: 1162
MYEALLKATPEYQKIAASFAKPGPAALFGLPPAGCALLYAALQKDLGRVLCIVTPGEAEATHFADDLKALGLSAAVFPPRDFMLRPVEGAGREYEYRRLSVLGSLAGGRLNAVCVPAEALLQYTVPRDEFLKNTLTLKPGMVYNREGLVDRLFAAGYVRRGQVDGPGQFSVRGDIVDIYAPDMRQPARVEYWDDEIDSISSFDLLTQRRDSALEKIYLSPAREVLFGDTAETAEALRSAIKKARGRHRTALEKATEADLAQLDSGLMPEAMDKYYGLRYPSPATLLDHLDTPLFILDEVGGIRDAQKATEFRRSEELTGLLEEGVLCPGLDVLYQTMDDLAAAAQKQSTLLCENFLRGMNEFKLKDLINAEAFSAPNWNGDLASLREDLAPLIAQGYAVTLFSGTPKDAAALTRDLADKGYSVSMSRDVRPTKGIVQVLPGHLTAGCTFPFAHAAVLSSRRHGLEEETAAETKKRKKNKNALSSLSDIKPGDYVVHQSHGIGMYAGIQRLEVQGATKDYLKVQYSGSDVLYVPVTQLDLLSRYTAPGDEEKVKLAKLGGAEWQRTRAKVKKATEEMAQELIELYARRRQATGYAFPPDGDWQRDFETRFDYDETDDQLNATAEIKQDMEKGWPMDRLLCGDVGVGKTEVALRAAFKCVMGGKQCAILAPTTLLAWQHYNTILSRMEAFPVKVEMMSRFRTAKQQKETLRGLQSGSVDIVVGTHRLLSKDVKFHDLGLVIIDEEQRFGVKHKEKLKENFIGVDMLTLSATPIPRTLNMAMSGIRDLSTIEQPPIERQPVETFVLEYNDVILAEAMKKELARGGQVYYLHNRVDNIEACAAHVSKLVPGARIGIAHGKMTEEELNPVWQHLLNGEIDILVCTTLIETGIDVRNCNTLIIEDADRMGLAQLYQIRGRVGRSGRKAYAYFTFRRDKTLTDIAQKRLSAIREFTAFGSGFRIAMRDLQIRGAGSLLGHSQHGHMEAVGYDLYVKMLGQAIARAKGEPVRRDKSECLVDLRVDAFIPEKYIADGPGRIEAYKRIAAIQTAEDAADVLDELIDRYGDPPPSVSDLVNVSLVRVQASAVGVTEVTQKKDTLTLQLESLDLPMIRGLLVAFNGRVTAGAGNRPYLSVTLQPDEKPLELLQSILKAMAEILNGGEKAKDSK*