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L2_040_089G1_scaffold_2456_2

Organism: dasL2_040_089G1_concoct_34_fa

near complete RP 45 / 55 MC: 11 BSCG 45 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 953..2806

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Campylobacter concisus UNSW2 RepID=U2FPU6_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 617.0
  • Bit_score: 1180
  • Evalue 0.0
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1242965 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter concisus UNSW2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 617.0
  • Bit_score: 1180
  • Evalue 0.0
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 99.0
  • Coverage: 617.0
  • Bit_score: 1173
  • Evalue 0.0

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Taxonomy

Campylobacter concisus → Campylobacter → Campylobacterales → Epsilonproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1854
ATGAGCGCCGCAAAAGACTCTTTTTCTCAGATAGAAGAGCTTTTTGTTGAAAATGCAAAAGGCTTTTTGACATACGAAAAATTAGTAAAATTATTAGACAAAGCTCCGACGGCTACGGTAGTAAAAAAGATAGAACAACTAGCAAAAACAAACAAAGTCCAGCTCATCACATCTGCTGAGGCTGCAAAACTTAGAAATTTAGCTGATGCTAAAAAACGTCAAGAAAATGCTCAAAAAAGTGACCAAGATATCGACGAGGATCTCGATCTTTCAGGCGAGAGCGACCTTTTAGAGTGGTCAAGATCAGATAGCCCAGTAAGGATGTATCTAAGAGAGATGGGTCAGATCGCGCTTCTTACAAAAGAAGAAGAGGTCGAGATCAGCAAGAGGATCGAGCTTGGCGAAGATATCATCATCGATGCATTTTGTTCGGTGCCGTTTTTGATCGATTTCATACTTGATTATAAAGAGCCGCTTATTAATAGAGAACGCCGCGTAAAAGAGCTTTTTAAAAGCTTTGAAGACGAGAGCGAAAATGAAAATGAAGATGGCGAAGAAGATATAGACGAAGATGATGAGGAGAACGAAGAGAACGAAACTCCTAAAAAATCAGCCAAAAACGACAAGCGCGCAGAAAAAGTTATAGAGAGTTTCAAAGCCCTTGAAAAGGCCAAAAAAGAGTGGCTAAAGACCGCAAATAAGCAAGATAAAGTTGAAAGCGACGACACAGCTTCAAAGATGACGCTTGCGTTTAAAAAGAAAATTTTAAAAGAGAAGCTGATGGATCTTGGTCCAACAAGCAAGCTAATCAGCGAGATCGTAAAATCAATGGAAACGGCTCTTAAAAGCGACGATGAATTTGATAGAGAGCTAAAGCGCCTAGAGTATCGCTTGCCGATGTTTAGCGACGAGCTAAAGAAAAATCACAAAAGCATCTTAAAAGATATCATCAAGCTTAGCAAAGAAGAGATCGCTGCTCGCGTGCCAGAGGCTACAATGGTCTCAACCTACGTCGAGATCAAAAAGCTTTTTACGACAAAAGAGGCAAGCAAGCAAGGCTTTGACCTTGAGCCAGCAAGACTAAAAGAGATTTTAGAGCAGATCAAACGCGGAAAGAAAATTTCAGACGAAGCAAAAGCTAGAATGGCTAAGTCAAACCTCCGTCTAGTCGTAAGTATCGCAAAACGCTATACAAACAGGGGCTTGCCATTTCTTGATCTCATCCAAGAGGGCAACATCGGCCTTATGAAGGCGGTCGATAAATTTGAATATAGAAAAGGCTATAAATTTTCAACCTACGCCACATGGTGGATCCGCCAGGCTATCTCGCGCGCGATTGCCGATCAGGCAAGGACGATTAGGATACCTATCCACATGATAGAGACGATCAATCGTATCAACAAAATCAACCGCAAATACCTCCAAGAAGAGGGAAAAGAGCCTGACGTAAGCGTCATCGCAAAAGAGGTCGGACTAAGCGTCGATAAGGTAAAACAGGTAATCAAGATCACAAAAGAGCCTATCAGCCTTGAAGCTCCGATCGCAAACGAAGAAGACGGTAAATTTGGAGATTTTGTTGAAGACAAAACTTCACTATCACCGATAGATCAAATTTTAAAAAGCGACCTCAGAGAGCAGATCGACGATGTGCTTTCACAGCTAAATGAGCGCGAAAAAGCGGTTATTTCGATGAGATTTGGCTTGCTTGAAGATGAGAGCGACCGCACACTTGAAGAGATCGGAAAGGCGCTAAACGTCACTCGTGAACGCGTCCGCCAGATAGAAAGCTCGGCTATCAAGAAACTAAAACACCCAAAAGTTGGTAGAAAACTTAAAAACTACATCGAGGGCTAA
PROTEIN sequence
Length: 618
MSAAKDSFSQIEELFVENAKGFLTYEKLVKLLDKAPTATVVKKIEQLAKTNKVQLITSAEAAKLRNLADAKKRQENAQKSDQDIDEDLDLSGESDLLEWSRSDSPVRMYLREMGQIALLTKEEEVEISKRIELGEDIIIDAFCSVPFLIDFILDYKEPLINRERRVKELFKSFEDESENENEDGEEDIDEDDEENEENETPKKSAKNDKRAEKVIESFKALEKAKKEWLKTANKQDKVESDDTASKMTLAFKKKILKEKLMDLGPTSKLISEIVKSMETALKSDDEFDRELKRLEYRLPMFSDELKKNHKSILKDIIKLSKEEIAARVPEATMVSTYVEIKKLFTTKEASKQGFDLEPARLKEILEQIKRGKKISDEAKARMAKSNLRLVVSIAKRYTNRGLPFLDLIQEGNIGLMKAVDKFEYRKGYKFSTYATWWIRQAISRAIADQARTIRIPIHMIETINRINKINRKYLQEEGKEPDVSVIAKEVGLSVDKVKQVIKITKEPISLEAPIANEEDGKFGDFVEDKTSLSPIDQILKSDLREQIDDVLSQLNEREKAVISMRFGLLEDESDRTLEEIGKALNVTRERVRQIESSAIKKLKHPKVGRKLKNYIEG*