ggKbase home page

cn_combo_scaffold_627_11

Organism: CN-SCN_Sphingopyxis_31x

megabin RP 48 / 55 MC: 32 BSCG 47 / 51 MC: 31 ASCG 12 / 38 MC: 5
Location: 8604..9788

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=1174684 species="Bacteria; Proteobacteria; Alp similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 397.0
  • Bit_score: 711
  • Evalue 8.10e-202
Ribonuclease D n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQR4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 397.0
  • Bit_score: 711
  • Evalue 5.80e-202
ribonuclease D similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 392.0
  • Bit_score: 710
  • Evalue 2.80e-202

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1185
ATGCAAATCCATCCGTTGATCGAGTCCAGCGCGGCGCTCCTTGAATTTGTCGACCTCATCAAAGACAGCGATTTCATCGCGGTCGATACCGAGTTCATGCGCGAGAATACCTTCTGGCCCGAACTGTGCCTGATCCAGATCGCGGACAGCAACCATGCCGCGGCGATCGACCCGATGGCGCCGGACATCGACCTGCAGCCGCTGCTCGACCTGCTCGTCGACAATGAGGACGTGCTCAAGGTCTTCCATGCCGGGGGGCAGGATGTCGAAATCATCTTCAACCTGACCGGCAAGACGCCGCATTCGATCTTCGACACGCAGATCGGCCAGATGGCGCTCGGTCAGGCCGAGCAGGTCGGCTATTCGAACCTGGTCGAGGCGTGGCTGGGGGTGCAACTCGACAAGGGCGCGCGTTTCACCGACTGGAGCCGCCGGCCGCTCGACAAGCGCCAGATCGACTATGCGATCGGCGACGTCACCCATCTCGCCAAGATCTTCCCGATGATGCTGAAGAAGCTGGTGAAGACCGGCCGCGGGCACTGGCTCGACGAAGAGATGGAAAAGCTCGCCGACCCGGCACACTACAGCGTCGATCCGGACAAGGCGTGGCTGCGGATCAAGGCGCCGACGCGCAAACCCGAGGTGCTCGGCCGGCTCAAGGCGCTGGCGGCGTGGCGCGAACGCGAGGCGCGGAACAAGAATTTGCCGCGCGGCCGCATCGTCAAGGACGAGACGCTCGCCGACCTCGCCGCGCACCCGCCGAAGGATCAGGATGGGCTGGGCCGAGTGCGCGGCCTGTCGGCGACGTGGAAATCGAACGATATCGGCGGGCGGCTGATGGAAGCGCTCGCCGGTGCGCAGCCGCTGGCGAAGGAAGACATGCCCGACCGCGCCCCGCGCGGGCCGGGGCTGGGCAAGGAGGGCGCGCTCGTCGCCGACCTGCTCAAGCTGCTGCTCAAGATCCGCTCGCGCGAACTCAATGTCGCGGCGCGGCTGATCGCGCGCAGCGACGATCTGGAAGCGCTCGCCGCCGGGCGCCGCGACGGCATCGCGATGATGCAGGGCTGGCGCTACGAGGTGTTCGGCCAGGCGGCGCTCGATCTGGTCGAGGGACGGATGGGTTTCGCCGTCCGGGGCGGTAAGCTGGTGATGAGCGAGATCGAGCCGGCGGCGGCCGACGCCTGA
PROTEIN sequence
Length: 395
MQIHPLIESSAALLEFVDLIKDSDFIAVDTEFMRENTFWPELCLIQIADSNHAAAIDPMAPDIDLQPLLDLLVDNEDVLKVFHAGGQDVEIIFNLTGKTPHSIFDTQIGQMALGQAEQVGYSNLVEAWLGVQLDKGARFTDWSRRPLDKRQIDYAIGDVTHLAKIFPMMLKKLVKTGRGHWLDEEMEKLADPAHYSVDPDKAWLRIKAPTRKPEVLGRLKALAAWREREARNKNLPRGRIVKDETLADLAAHPPKDQDGLGRVRGLSATWKSNDIGGRLMEALAGAQPLAKEDMPDRAPRGPGLGKEGALVADLLKLLLKIRSRELNVAARLIARSDDLEALAAGRRDGIAMMQGWRYEVFGQAALDLVEGRMGFAVRGGKLVMSEIEPAAADA*