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cn_combo_scaffold_1023_23

Organism: CN-SCN_Sphingopyxis_31x

megabin RP 48 / 55 MC: 32 BSCG 47 / 51 MC: 31 ASCG 12 / 38 MC: 5
Location: comp(25011..25412)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T2B0_CAUSK similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 129.0
  • Bit_score: 117
  • Evalue 9.50e-24
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:KGB52711.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 133.0
  • Bit_score: 171
  • Evalue 1.00e-39
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 129.0
  • Bit_score: 117
  • Evalue 2.70e-24

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Taxonomy

Sphingopyxis sp. LC81 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
ATGACGCAGGAAGTGTTCATCCGCCTGGCCCAGACGCAGACAGACCATTTCGATTCCACCGAGGCGTTCATCTTTCGCATCGCGACGAACCTGCTGCGCGACCGCTCGCGCCGCGACCGCGTGCGCAATGCCTACCGCCAGTCCGTCGAGCAGGATGATGCGGGCGAGGTCGATCCCCTCGACCCGCACCGCATCGCCGCCGCGCGCGAAACCATCGGCAAGCTGTGGGCGGCGATCCAGGCGCTGCCCGAGCCGACCCAGCAGATTTTCATCCTCTACCGCGTCGAGAATATGGACAAGCAGACGATTGCCGACAATTTCGCCTATAATGTGCGGACAGTCGAAAAGCATATTTCTCGCGCGCTGGTCTTTCTCGCTCGCCGGGTAGGGGGAAGGCCATGA
PROTEIN sequence
Length: 134
MTQEVFIRLAQTQTDHFDSTEAFIFRIATNLLRDRSRRDRVRNAYRQSVEQDDAGEVDPLDPHRIAAARETIGKLWAAIQALPEPTQQIFILYRVENMDKQTIADNFAYNVRTVEKHISRALVFLARRVGGRP*