ggKbase home page

cn_combo_scaffold_9029_1

Organism: CN-SCN_Sphingopyxis_31x

megabin RP 48 / 55 MC: 32 BSCG 47 / 51 MC: 31 ASCG 12 / 38 MC: 5
Location: 2..1486

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9U5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 494.0
  • Bit_score: 933
  • Evalue 1.20e-268
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:ENY80498.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 494.0
  • Bit_score: 933
  • Evalue 1.60e-268
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 89.4
  • Coverage: 498.0
  • Bit_score: 854
  • Evalue 1.10e-245

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1485
CGGCGCTGGCTCGTGCTCGCGGTCGCCTGGGGCATTTGCATCCTCGGCTGGCTGGCGATCGCGTCGATCCCGAACCGCTATGACAGCCGCGCGCGCCTGCTTGTCGATGTGAACCAGATCCTGCCCGACGATGCGCAGGGCGGATCCTTTGGCGGGCGCCAGCAGATCGACCAGATTCGCGAAACGCTGACCAGCGCGCGCAATCTGGAGAAGGTCGCGACGACCACCGGACTGATCCCGGCGGGTGCGGGCGAGCGCGAGAAAGCGGGCGCGGTCGCGATGCTGCAAAAGAATATCAAGATCGTGCCGCAGCAGGACAATATCTTCGAAATCACGTCGAGCGTCGGCATCGGCAGCCTGTCGGACGCCGACAATGCCAAGCTGGCGAGCGGTGTGCTTGACAGCCTGATCACCGTCTTTCGCGACGATCAGTTGCGCGGGGGCCGCGTCGATGCGCGCGAGGGGCTGAAATTCCTCGATTCACAGATCGCCGACCGCGAAAAATCGCTGCGCGAGATCGAGGCGCGGCGCGCCGCGTTCGAGGCGCAGAATATCGGCCTGATTCCGGGCGGCGCCGGATCGCCCGCCCAGCGCGTCGATGCGGCGCGCGCCGAACTCAGCCAGATCGAAACACAATTGGTTGCGGCGCAGGCGGCGCTGGCGGCCGCCAACGGCCAGCTCGCCTCGACCCCCGCGACGGTGCCGGGCGCAGGCGGTGTTGGCGGCGGCGTCGCGCGGCAGCAGCTTGCGGGCGCGCAGAACGAGCTTGCATCGATGCGCGCACGCGGGCTGACCGACGCGCACCCCGATGTGATCGCGCTCAAGAGTCAGATCGCCTCGCTCAAGGCGCAGGCCGACCGCGAAGGCAATGGCGGTGGCGGCGGGATGCAGAACCCCGCCTATTCGTCGCTGGCCGCGATGCGCGCCGAGCGGCAGGCGACCGTCAGCGCGCTGTCGGCGCGCAAGGCGCAGCTCACTGGCGACATCGCGCGCATCACCTCGCAGCAGATCCAGAACCCGGGCATTGCCGCGGAATATGACCGGATCAACGGCGAATATACGGCGCAGAAGGCACAGTATGACAAGCTGCTCGCGCAGCGCGAACAGGTGCGGCTGCGCGGCGACGTGCAGACCGAAACCGACGCGATCCGGATCGAGTTGCTCGATCCGCCGTCGAAGCCGACCAGCCCTGCGGCGCCCAATCGCCCGCTGTTCCTGACGCTCGTCCTGCTCGCCGGGATTGGCGGCGGCATCGGCGCGGCTTTCGGCCTGGCGCAGGTGCGCACAAGCTATGCCACCGCCGCGAAGCTCGAGCGCGCGAGCGGACTTCCCGTCATCGGATCGATCACCGAGGTCGTGACGCCCGACCGGCACGTCGAGCGGCGCAAGCGGCTTGTCTGGCTTGCCAGCGGGGGCGCGGCGCTCGTCGGCCTCTATGCGCTGCTGCTGGTCGCCGAGTTCGTCCAGCGTGGCATGGTCGCGTGA
PROTEIN sequence
Length: 495
RRWLVLAVAWGICILGWLAIASIPNRYDSRARLLVDVNQILPDDAQGGSFGGRQQIDQIRETLTSARNLEKVATTTGLIPAGAGEREKAGAVAMLQKNIKIVPQQDNIFEITSSVGIGSLSDADNAKLASGVLDSLITVFRDDQLRGGRVDAREGLKFLDSQIADREKSLREIEARRAAFEAQNIGLIPGGAGSPAQRVDAARAELSQIETQLVAAQAALAAANGQLASTPATVPGAGGVGGGVARQQLAGAQNELASMRARGLTDAHPDVIALKSQIASLKAQADREGNGGGGGMQNPAYSSLAAMRAERQATVSALSARKAQLTGDIARITSQQIQNPGIAAEYDRINGEYTAQKAQYDKLLAQREQVRLRGDVQTETDAIRIELLDPPSKPTSPAAPNRPLFLTLVLLAGIGGGIGAAFGLAQVRTSYATAAKLERASGLPVIGSITEVVTPDRHVERRKRLVWLASGGAALVGLYALLLVAEFVQRGMVA*