ggKbase home page

cn_combo_scaffold_15102_5

Organism: CN-SCN_Sphingopyxis_31x

megabin RP 48 / 55 MC: 32 BSCG 47 / 51 MC: 31 ASCG 12 / 38 MC: 5
Location: 4378..5598

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor-like protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WHL8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 406.0
  • Bit_score: 824
  • Evalue 4.80e-236
TonB-dependent receptor-like protein {ECO:0000313|EMBL:ENY83138.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="S similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 406.0
  • Bit_score: 825
  • Evalue 3.00e-236
TonB-dependent receptor-like protein similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 407.0
  • Bit_score: 476
  • Evalue 6.90e-132

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1221
GTGTTCCCGGTCAACGACGGTGCAACCGACGTTACCGGCGGCGTTCTGCAGAAGCGTGACCGCCTCTCCTATGCAACGCTCAACCAGATTTCCGGCGAGTATCGCGGGGAGTTTATGGATGGCAGCCTCGTTACGACGCTCGGCATTCGCGCGCCGTTCTTCCGGCGTAATCTGAACAACTATTGCTTCACGACGAGCGACTCGGGCTTCGTCGACTGCTTTGGTCAGGGCGACCCGCGCAACGCGACCTATGCAGCTGCGAACCCGGCGGTTCAGGGCCCGCAGCAGCGTGTGCTCAAGTATGACGACATTCTTCCGAACGTCGGCCTGCTGTTCAAGCCCAGCAACCGGATCTCGGTGTTCGCGAACTATTCGAAGGGCCTGCAGGTTCCGGGCACGGACTCGCTTTACAACGCCTTCTTCTTTGCACCGAACACCGCATCGGCGCGTCCGAACCCTGAAAAGTCGGATAACTTCGACCTTGGCGTTCGCTATCGCACCGGCCAGGTTCAGGCGCAGCTTTCGGGCTGGTTCACGAAGTACAGCGATCGTCTCGCTTCGGCCTATGATCCCGTCACCGAACGCAACGTCTACCGTAACCTTGGTCGTGTCGACAAATATGGCATCGACGGCAGCGTTGCCTTCCAGCCGATCCCGGAACTGGCTCTCTACGCCTTTGGCTCGTGGATGAAGTCGGAGATCAAGGACAATGTCCAGGCTGGCAGCTGCACCGCGGTCAATACTGCCATCGGTTGCGCCGCGATCGGCGATCCGCTGTTCGCCCAGACTGCCGGCAAGCGTGAATCGGGTTCGCCCGAATATACGTTCGGCGGCTCGGTCCGCGGAACGCTGGGGCCGGTCGAACTGGGTATCACCGGCAAGCGCACGGGCGGCCGGTTTATCTATGACACCAATCTGCCGATCTATGCGGGTACGCAGGCTGCACCGACGATTGTCTATCCGGCGAAAACCAACGCCTATTGGCTGGTCAACCTCGATGCGCGCCTGAGCCTGGAGTTTCTGGGTCTGAACGACAAGACCTTCTTCCAGCTCAACGTCTACAACCTGTTCGACAATCTCTATGTCGGCTCGTACACGACCAGCCTGAATCAGGGCGGCGTTCTGGGTTCGGGCCTCGTGACCGCCAACCCGGGCTCGGTTCCCTTCGCCCAGATCGGCGCGCCGCGCACGATCAGCGGCACGCTGACCGTCGGCTTCTAA
PROTEIN sequence
Length: 407
VFPVNDGATDVTGGVLQKRDRLSYATLNQISGEYRGEFMDGSLVTTLGIRAPFFRRNLNNYCFTTSDSGFVDCFGQGDPRNATYAAANPAVQGPQQRVLKYDDILPNVGLLFKPSNRISVFANYSKGLQVPGTDSLYNAFFFAPNTASARPNPEKSDNFDLGVRYRTGQVQAQLSGWFTKYSDRLASAYDPVTERNVYRNLGRVDKYGIDGSVAFQPIPELALYAFGSWMKSEIKDNVQAGSCTAVNTAIGCAAIGDPLFAQTAGKRESGSPEYTFGGSVRGTLGPVELGITGKRTGGRFIYDTNLPIYAGTQAAPTIVYPAKTNAYWLVNLDARLSLEFLGLNDKTFFQLNVYNLFDNLYVGSYTTSLNQGGVLGSGLVTANPGSVPFAQIGAPRTISGTLTVGF*