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L2_040_124G1_scaffold_237

Search features with annotation key words

Displaying items 31-45 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_237_31
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(32828..33661)
DNA (834bp) protein (278aa)
Carbon-monoxide dehydrogenase, middle subunit n=1 Tax=Clostridium tetani 12124569 RepID=U6F2P9_CLOTA
FAD binding domain in molybdopterin dehydrogenase family protein {ECO:0000313|EMBL:KIE45640.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
carbon-monoxide dehydrogenase, middle subunit
L2_040_124G1_scaffold_237_32
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33648..35993)
DNA (2346bp) protein (782aa)
Carbon-monoxide dehydrogenase, large subunit n=1 Tax=Clostridium tetani 12124569 RepID=U6EZ29_CLOTA
Molybdopterin-binding domain of aldehyde dehydrogenase family protein {ECO:0000313|EMBL:KIE45460.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
carbon-monoxide dehydrogenase, large subunit
L2_040_124G1_scaffold_237_33
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36153..36782)
DNA (630bp) protein (210aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
uracil phosphoribosyltransferase n=1 Tax=Clostridium sp. JC122 RepID=UPI0002882365
L2_040_124G1_scaffold_237_34
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(36795..37244)
DNA (450bp) protein (150aa)
Ribose 5-phosphate isomerase B {ECO:0000313|EMBL:KIE45296.1}; EC=5.3.1.6 {ECO:0000313|EMBL:KIE45296.1};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ribose-5-phosphate isomerase B (EC:5.3.1.6)
ribose 5-phosphate isomerase n=1 Tax=Clostridium sp. JC122 RepID=UPI0002887C8A
L2_040_124G1_scaffold_237_35
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37299..37751)
DNA (453bp) protein (151aa)
Low molecular weight protein-tyrosine-phosphatase ywlE {ECO:0000313|EMBL:KIE45571.1}; EC=3.1.3.48 {ECO:0000313|EMBL:KIE45571.1};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
protein tyrosine phosphatase n=1 Tax=Clostridium sp. JC122 RepID=UPI000288E4E9
protein tyrosine phosphatase
L2_040_124G1_scaffold_237_36
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37791..38840)
DNA (1050bp) protein (350aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
tRNA threonylcarbamoyladenosine biosynthesis protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000288EC94
sua5 YciO YrdC YwlC family protein
L2_040_124G1_scaffold_237_37
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39097..39822)
DNA (726bp) protein (242aa)
zinc transporter n=1 Tax=Clostridium sp. JC122 RepID=UPI0002896790
ZIP Zinc transporter family protein {ECO:0000313|EMBL:KIE45422.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
zinc uptake transporter
L2_040_124G1_scaffold_237_38
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40043..40477)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000288C257
Putative membrane protein {ECO:0000313|EMBL:KIE45359.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_237_39
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40661..41743)
DNA (1083bp) protein (361aa)
peptide chain release factor 1 n=1 Tax=Clostridium sp. JC122 RepID=UPI000288FCAF
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
prfA; peptide chain release factor 1
L2_040_124G1_scaffold_237_40
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41930..42781)
DNA (852bp) protein (284aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Clostridium sp. JC122 RepID=UPI0002889AD8
protein-(glutamine-N5) methyltransferase, release factor-specific
L2_040_124G1_scaffold_237_41
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42756..43733)
DNA (978bp) protein (326aa)
membrane protein n=1 Tax=Clostridium sp. JC122 RepID=UPI00028957DB
Uncharacterized protein {ECO:0000313|EMBL:KIE45407.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
protein of unknown function DUF1385
L2_040_124G1_scaffold_237_42
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43946..44563)
DNA (618bp) protein (206aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
thymidine kinase n=1 Tax=Clostridium sp. JC122 RepID=UPI00028956C6
Thymidine kinase
L2_040_124G1_scaffold_237_43
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


44958..45170
DNA (213bp) protein (71aa)
50S ribosomal protein L31 n=1 Tax=Clostridium sp. BL8 RepID=T0N3A4_9CLOT
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
rpmE; 50S ribosomal protein L31
L2_040_124G1_scaffold_237_44
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45295..46758)
DNA (1464bp) protein (488aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
transcription termination factor Rho n=1 Tax=Clostridium sp. JC122 RepID=UPI000287D430
rho; hypothetical protein
L2_040_124G1_scaffold_237_45
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47279..48982
DNA (1704bp) protein (568aa)
Methyl-accepting chemotaxis protein signaling domain protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2ED40_9FIRM
Methyl-accepting chemotaxis (MCP) signaling domain protein {ECO:0000313|EMBL:KIE45403.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
Membrane associated methyl-accepting chemotaxis protein (with HAMP domain)
Displaying items 31-45 of 45 in total

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