ggKbase home page

L2_040_124G1_scaffold_787_13

Organism: dasL2_040_124G1_metabat_metabat_4_fa_fa

near complete RP 42 / 55 MC: 1 BSCG 46 / 51 MC: 4 ASCG 13 / 38 MC: 1
Location: 9587..10093

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q897V6_CLOTE similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 168.0
  • Bit_score: 273
  • Evalue 7.60e-71
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:KIE46816.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 160.0
  • Bit_score: 309
  • Evalue 1.80e-81
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 168.0
  • Bit_score: 273
  • Evalue 2.20e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium argentinense → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 507
TTGCAAAGAAAGGTAGGAAGTCAATTGAATAAAGATACATTTATAGATAAAGTTCTTGAGACTGAATCTACTTTATATCATGTATCTAAATCAATTTTGAGCTATGATCAAGATTGTGAAGATGCAGTTCAAGGAGCAATTTTAAAAGCTTATAATAAATTAAATACATTAAAGGAAGAACAATATTTTAAGACATGGTTAGTTAGGATACTCATAAATGAATGTTATAGTTTAAAACGTAGTGAATGTCCAACAGTACCTTATGAAGAGTATTTTGAGTTTACCAAAGCTGATGATGAAAAGGACTATAGCGAATTATATTTGGCAATTCAAAAATTACCAGAACGGATTCGTATTACAATTGTACTTTATTATGTAGAGGGATATTCAATAGAAGAAATTAAAAAAATTTTAAAAATACCTGCAGGAACAGTAAAGAGTAGATTATCAAAAGGACGAAAGTTATTAAAAATAGAACTAGAAGATATGGAGGTATCATATGAATAA
PROTEIN sequence
Length: 169
LQRKVGSQLNKDTFIDKVLETESTLYHVSKSILSYDQDCEDAVQGAILKAYNKLNTLKEEQYFKTWLVRILINECYSLKRSECPTVPYEEYFEFTKADDEKDYSELYLAIQKLPERIRITIVLYYVEGYSIEEIKKILKIPAGTVKSRLSKGRKLLKIELEDMEVSYE*