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L2_040_365G1_scaffold_1072_13

Organism: dasL2_040_365G1_concoct_72_fa

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(16219..16446)

Top 3 Functional Annotations

Value Algorithm Source
Negative regulator of genetic competence clpC/mecB n=27 Tax=Bifidobacterium RepID=D3R4L6_BIFAB similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 70.0
  • Bit_score: 119
  • Evalue 1.10e-24
Clp protease ClpX similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 75.0
  • Bit_score: 151
  • Evalue 5.50e-35
Clp protease ClpX {ECO:0000313|EMBL:AIZ16134.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 75.0
  • Bit_score: 151
  • Evalue 2.70e-34

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Taxonomy

Bifidobacterium pseudolongum → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 228
CGTCCGCTGCGTCGCGTGATCCAGCGCGACATCGAAGACGCCGTGTCGGAGAAAATCCTCATGGGCGAGCTCAACGACAACGAGCGCGTGATCGTGGACGCGGACGGCGAGGGCATCCTCGGCGAGTTCACGTTCCACAGCGAGCCATTCGAGCTTCCCGCCGCGGGTGAAGGCGATCCAAGCAAGGATGTCGTGGAGGAGAGCGCCACACCGCAGCCCGTGCAGTGA
PROTEIN sequence
Length: 76
RPLRRVIQRDIEDAVSEKILMGELNDNERVIVDADGEGILGEFTFHSEPFELPAAGEGDPSKDVVEESATPQPVQ*