ggKbase home page

L2_041_000G1_scaffold_3050_5

Organism: dasL2_041_000G1_concoct_54_fa

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 3394..3921

Top 3 Functional Annotations

Value Algorithm Source
iron-sulfur cluster assembly protein HesB n=1 Tax=Pseudomonas pyrrocinia RepID=UPI0003030C2C similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 187.0
  • Bit_score: 299
  • Evalue 1.80e-78
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1542965 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSHR3999.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.9
  • Coverage: 194.0
  • Bit_score: 293
  • Evalue 1.80e-76
RNA-binding protein Hfq / domain of unknown function similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 193.0
  • Bit_score: 292
  • Evalue 6.10e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Burkholderia sp. MSHR3999 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGGCCAATCCCGCAGAATCCCATCCGCAAAACGACTTCATCAATTCGGCGCGCAAGGAACGTAAGCGCGTTGAAATCTATCTCGTCAACGGCATCCGCCTGACGGGCTGCATCGAGTCGTTCGACCAGTACCTGGTGATGCTGCGCACCCCCGTGGGTCTGCAAGGCATCTACAAGCGCGCCATTTCGACCATCCAGCTCGACACGGGCGGCTCGCGTCCGGGCGGCGGCGGTGCACGCGGTCCGCGCACTGGCGGCGGCCGCAGCGGTGGCCGCGAAGGTGGCGGCCACGGTCCGTACGGCTCGCATGGCGGCCCGCGCGAGCCGCGAGGCGAAGGTTACGCGCCGCGTGAGCCGCGAAGCGAAGGCTATGCGCCGCGCGAGCCGCGAGAATCCTACGGATACGGCGCACCGCGCGACGCCGGCGATCAGTCGTCCTCCGCGCCGGTTGAGCCGCGCGGCAACGGCGGCTCCAACGGGCCGGTGATCGTCACGCGCCGCCGGCGCATCGTGCCGGACGGCCAGTAA
PROTEIN sequence
Length: 176
MANPAESHPQNDFINSARKERKRVEIYLVNGIRLTGCIESFDQYLVMLRTPVGLQGIYKRAISTIQLDTGGSRPGGGGARGPRTGGGRSGGREGGGHGPYGSHGGPREPRGEGYAPREPRSEGYAPREPRESYGYGAPRDAGDQSSSAPVEPRGNGGSNGPVIVTRRRRIVPDGQ*