ggKbase home page

L2_047_000G1_scaffold_1134_3

Organism: dasL2_047_000G1_concoct_18_fa

near complete RP 48 / 55 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(2309..3208)

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory helix-turn-helix , lysR family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VLF1_CLOBI similarity UNIREF
DB: UNIREF100
  • Identity: 30.7
  • Coverage: 296.0
  • Bit_score: 154
  • Evalue 1.60e-34
Uncharacterized protein {ECO:0000313|EMBL:KGJ50808.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.7
  • Coverage: 296.0
  • Bit_score: 154
  • Evalue 1.30e-34
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 28.2
  • Coverage: 305.0
  • Bit_score: 137
  • Evalue 4.30e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. NCR → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 900
ATGGAATATAATCAATTACGTTATGTTGTTGAAATAGTAGAAACAGGCAGTATATCAAAAGCTGCTTCCAATTTATATATTTCTCAACCTAATTTAAGTGCACAAATTAATTCTTTAGAAAATGAGTTAGGACGAATTATATTTGAGAGAACAAATAAAGGAGTTAAACTAACTACAGAAGGTAGGGAAATATATCATTATGCCAAGACCTTAGTAAATCAATTTGAACTAATAGAAAAGAAACTCTTATATGATCATAATGACAATAAAATTAAGATAGCTTCATTTGGATCGTGTATAGTTAGAAGAAAATTCACAGACTTATGCGCTATATTTAAGAATAAGAACTATGAATTCATTTTATATGATGATAATTTTGATGATGCAATAGACAAACTAATTAATAGAGACGTAGATATAGCTTTTATACAATATAGCCACTATCAAGAGAAACACATTTTAAAGTATCTTGAAAATGAAGACTTAGAATTTGAAGAGCTTATTGAAGGTGAATTAAATATTCATGTAAATGAAAAATCCCTATTAAACCATAGAGAGTATATATCTGTAGATGATTTAAATGGATTGTTTTGTGTAAAAAAACAGCAATTATTTAGAGGATTATTTAATTTAAATTATGAAGTTAAGGAACTTGGATTAGATACAAACAAAAAGATAATTAGAGTAAATGATTCTAAAGCCTATGAAGACATACTGATAAACCTACCATCTTTCTCAGTATGTGTAGATTGGAAAACGGAATATAATTTTAATGGCTATTTAAAAAGAATACCATTTAAGGATAAAAAGATTGTTATGAAATGTTCAGTAGTAAAAAGAAGAAATGAACTCTTAAAAGATGAATTAAAATTATTAATAGAGGAAATAAAAGCTTTATAG
PROTEIN sequence
Length: 300
MEYNQLRYVVEIVETGSISKAASNLYISQPNLSAQINSLENELGRIIFERTNKGVKLTTEGREIYHYAKTLVNQFELIEKKLLYDHNDNKIKIASFGSCIVRRKFTDLCAIFKNKNYEFILYDDNFDDAIDKLINRDVDIAFIQYSHYQEKHILKYLENEDLEFEELIEGELNIHVNEKSLLNHREYISVDDLNGLFCVKKQQLFRGLFNLNYEVKELGLDTNKKIIRVNDSKAYEDILINLPSFSVCVDWKTEYNFNGYLKRIPFKDKKIVMKCSVVKRRNELLKDELKLLIEEIKAL*