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L2_047_000G1_scaffold_106_27

Organism: dasL2_047_000G1_concoct_61_fa

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(26711..27355)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D667E7 related cluster n=1 Tax=unknown RepID=UPI0003D667E7 similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 214.0
  • Bit_score: 422
  • Evalue 2.20e-115
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 214.0
  • Bit_score: 422
  • Evalue 3.10e-115
rplD; 50S ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 67.1
  • Coverage: 216.0
  • Bit_score: 279
  • Evalue 5.00e-73

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Taxonomy

Varibaculum cambriense → Varibaculum → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATGACTAATCTTTCGCTAAACGTAACTGATCCCGCTGGTAAGCAAGTTGGCAGCGTTGATCTGCCCGCCAGCATTTTTGATCGGGATCCCAATATCGCTTTAATGCACCAGGTAGTTAACGCACAGCTAGCGGCGGCTCGTCAGGGTACTCACTCCACGAAGACGCGTGGGCGGGTGCGCGGTGGCGGCAAGAAGCCGTGGCGTCAGAAAGGCACCGGCCGGGCTCGTCAAGGCTCCATTCGCGCACCGCAGTGGCGTGGTGGCGGAGTAGCCCACGGTCCACAGCCGCGCGATTACTCCCAGCGCACCCCCAAGAAGATGAAGGCGGCAGCTCTGGCTTGCGCCCTGTCTGATCGGGTACGCAAGGATCGTATGCATCTCGTATCTCATTTGGTAGCCGGGGATACCCCTTCCACCAAAGCGGGTCGCGAACACATCGAATCCCTGGTAGATCAGCGCTACGTTCTGGTAGTGCTGAGCCGCTCGGAAGAAGAACAGGTATTGTCAGTGCGTAACCTGCCGCAGGTGCATCTGCTCATGGTTGACCAACTCAATACTTACGACGTACTCAACAATGAGGACGTTATCTTCACTGAGGCCGCGATTCGCCAGTTCATCGCCGATAAGACCGGACAGGAGGCGTAA
PROTEIN sequence
Length: 215
MTNLSLNVTDPAGKQVGSVDLPASIFDRDPNIALMHQVVNAQLAAARQGTHSTKTRGRVRGGGKKPWRQKGTGRARQGSIRAPQWRGGGVAHGPQPRDYSQRTPKKMKAAALACALSDRVRKDRMHLVSHLVAGDTPSTKAGREHIESLVDQRYVLVVLSRSEEEQVLSVRNLPQVHLLMVDQLNTYDVLNNEDVIFTEAAIRQFIADKTGQEA*