ggKbase home page

L3_058_000G1_scaffold_3523_15

Organism: dasL3_058_000G1_concoct_79_sub_fa

near complete RP 43 / 55 MC: 3 BSCG 44 / 51 MC: 1 ASCG 13 / 38
Location: 13947..14684

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 245.0
  • Bit_score: 294
  • Evalue 8.60e-77
pseudouridylate synthase I (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 58.4
  • Coverage: 245.0
  • Bit_score: 286
  • Evalue 6.10e-75
tRNA pseudouridine synthase A n=1 Tax=Clostridium sp. CAG:58 RepID=R6RNQ8_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 245.0
  • Bit_score: 294
  • Evalue 6.10e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:58 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 738
ATGAATCTGAAGCTCACCATCCAATACGACGGCGCCCGCTACGACGGCTGGCAGCGCCAGGGCAACACGGACAGCACCATCCAGGGCAAGCTGGAGGGGGTCCTCTCCCGCATGGCGGGGGAGGCGGTGGAGATCCACGGCGCCGGACGCACCGACGCGGGGGTCCACGCCCTGGGCCAGGTGGCCAGCGTCCGCCTGCCGGGCACGTGGGAGCCCGGGGAGGTGCGCGCCTACCTCAACCGCTACCTCCCCGAGGACATCGCCGTGACCGGGGCGGAGCGGGCGGGGGAGCGCTTCCACGCCCGGCTCAACGCCGTGGGCAAGACCTACCGCTACGCCATCCGCCTGGGGGATGTCCCAGACGTGTTCCGCCGGAAGTACCAGCTCCGGGTGGAGGAGGCGCTGGACCTGGCGGCCATGGAGCGGGCCGCTGCCGCCCTGACCGGGCGGCACGACTACCGCTCCTTCTGCTCCAACCGGCGCTTCAAGAAGTCCACCGTGCGCACGGTGGACGCCATCGGCATCCTCCGCCGGGGGGACGACCTGGACCTTACCTTTCACGGGGACGGGTTTCTCTACCACATGGTGCGCATCCTCACCGGCACCCTGCTGGAGGTGGGCGTGGGAAAGCGCGCCCCCGGGGAGATGGCGGCCATCCTGGCGGCCCGGGACCGCTCCGCCGCCGGTCCCACCGCCCCGCCCCAGGGACTCACCCTGATGGAAGTGGAATATCCATAA
PROTEIN sequence
Length: 246
MNLKLTIQYDGARYDGWQRQGNTDSTIQGKLEGVLSRMAGEAVEIHGAGRTDAGVHALGQVASVRLPGTWEPGEVRAYLNRYLPEDIAVTGAERAGERFHARLNAVGKTYRYAIRLGDVPDVFRRKYQLRVEEALDLAAMERAAAALTGRHDYRSFCSNRRFKKSTVRTVDAIGILRRGDDLDLTFHGDGFLYHMVRILTGTLLEVGVGKRAPGEMAAILAARDRSAAGPTAPPQGLTLMEVEYP*