ggKbase home page

L3_068_000M1_scaffold_4586_6

Organism: dasL3_068_000M1_concoct_1_fa

near complete RP 49 / 55 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 5857..6564

Top 3 Functional Annotations

Value Algorithm Source
PspA/IM30 family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KRP0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 235.0
  • Bit_score: 442
  • Evalue 2.30e-121
PspA/IM30 family protein {ECO:0000313|EMBL:ERJ94947.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 235.0
  • Bit_score: 442
  • Evalue 3.20e-121
Phage shock protein A (IM30), suppresses sigma54-dependent transcription similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 231.0
  • Bit_score: 288
  • Evalue 9.10e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus callidus → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 708
ATGGGTATTTTTTCAAGAATTGGCGATGTCGTAAAGTCTAACATCAATGACCTGATCGATCGTGCAGAAGATCCGGAGAAAATGGTAAAGCAGATCATTCTGGATCTGCAAAAGGAAGTCAGCAACGCCACCACCGCACTGGGCAAGGCAAAGGCAAGCGAACGCATTGCCAAGCGGCAGTATGACGATGCGGTAAAGACTTCCGCAGACTGGGAAATGAAAGCAAAGGCTGCCCTAAATGCCGGCGAAGTTGATCTGGCAAAGAAGGCACTTTCCAATAAGGTAAAGGCAGACGAGTCTGTCAAGCAGTATCAGCAGATGTATGAGCAGATCGCTGCCCAGACGGCACAGCTACAGGAACAGGTGGAAACCCTGAAGTCCAAGCTGGACGAAGCCAAGAGCCGTCAGGCAATGCTGATCGCACGCTCTCAGATGGCAAAGACCCAGAAGAATCTGGCACAGTCGGTGGGCGGTCTGGATTCTTCCAGTGCCATGGATAAGTTCAACCGCATGGAAGAAAAGGTGACACGGCAGGAGGCAGAGGCAGAGGCATTTGCCGAGATCGCCGGTTCCAGCAGCACACAGGACGAAAAGACCTTTGCAGAATTGCAGCATGATATGGACGTAGATGCAGAACTGCAGCGGTTAATGGCAGAGATGGGGCAGACCGATGCCGCTTCTGCAACAGAAGGGAGTGCGGCAGAATGA
PROTEIN sequence
Length: 236
MGIFSRIGDVVKSNINDLIDRAEDPEKMVKQIILDLQKEVSNATTALGKAKASERIAKRQYDDAVKTSADWEMKAKAALNAGEVDLAKKALSNKVKADESVKQYQQMYEQIAAQTAQLQEQVETLKSKLDEAKSRQAMLIARSQMAKTQKNLAQSVGGLDSSSAMDKFNRMEEKVTRQEAEAEAFAEIAGSSSTQDEKTFAELQHDMDVDAELQRLMAEMGQTDAASATEGSAAE*