ggKbase home page

L3_068_000M1_scaffold_10242_3

Organism: dasL3_068_000M1_concoct_1_fa

near complete RP 49 / 55 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(3018..3704)

Top 3 Functional Annotations

Value Algorithm Source
Putative sensory transduction protein RegX3 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K5D3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 222.0
  • Bit_score: 434
  • Evalue 4.60e-119
Putative sensory transduction protein RegX3 {ECO:0000313|EMBL:ERJ93711.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 222.0
  • Bit_score: 434
  • Evalue 6.40e-119
phoB; Two-component system transcriptional regulator PhoB similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 226.0
  • Bit_score: 298
  • Evalue 1.10e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus callidus → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 687
TTGGCAAACATATTTTGTGTGGAAGACGACACCGGCATTCGGGAACTCATCACCTGTGCTCTCCAGTCCGGCGGCTATACTGCGAAGGGCTTCCCTGACGGAAAAAGCTTTTTCCAGCGTGTACAGGAAGAACAGCCGGCATTGATCCTGCTGGACATCATGCTACCGGACGAGGACGGCATCTCGATTCTGAAACGACTGAAATCCGATGCGGCAACGGCGGAAATTCCTGTCATCATGCTTTCGGCGAAGTCCTCGGAGATCGACAAGGTCACCGGACTGGAAAACGGTGCAGACGATTATATCACCAAGCCATTCGGCATCATGGAACTGCTGTCCCGCGTCAAGGCGGTGCTGCGGCGGAGCCATGTGCAAAAGCCGGAACAGCAGCAGGTGCTCTCTGCCCATGACCTGACCATTGACCTGAACCAGCGTACCGTGGTCTATCTGGAAACGGAGATCGTTCTCACCTATAAGGAGTTCGAACTGCTGTCCTATCTGGTACGCAACCGCGGCTCTGCCATTTCCCGCGACCGGCTGCTGGAACAGGTTTGGGGCTTCTCCTATGAGGGCGAAACCAGAACCGTAGACGCTCATGTCAAGACGCTGCGGCAAAAGCTGGAGGCTGCCGGCTGTACCAATCTCATTCACACAGTACGGGGTTACGGCTATAAGATCGGAGGGTAA
PROTEIN sequence
Length: 229
LANIFCVEDDTGIRELITCALQSGGYTAKGFPDGKSFFQRVQEEQPALILLDIMLPDEDGISILKRLKSDAATAEIPVIMLSAKSSEIDKVTGLENGADDYITKPFGIMELLSRVKAVLRRSHVQKPEQQQVLSAHDLTIDLNQRTVVYLETEIVLTYKEFELLSYLVRNRGSAISRDRLLEQVWGFSYEGETRTVDAHVKTLRQKLEAAGCTNLIHTVRGYGYKIGG*