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L3_069_000G1_scaffold_2582_5

Organism: dasL3_069_000G1_concoct_128_fa

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: 4329..7907

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 1192.0
  • Bit_score: 2293
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAJ8_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 1192.0
  • Bit_score: 2293
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 1194.0
  • Bit_score: 1706
  • Evalue 0.0

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Taxonomy

Collinsella intestinalis → Collinsella → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3579
ATGCTTATTCACCGCATAGCCGCGCAGCTCTACACCGCGGAAGCGCTTCAGGACATCGAGGCGGCCCTCGCCGCTGGTGAGGACGCCACGCTTGCGATTTCCCAATCCGGCCGCACCCTTGCGGTCGCGGCGCAGTTTGCCCGCACCCCGCGCCCCACGGTGTATATCGTTTCGGGCGAGGAGGCGGCAGATCGGGCGGCCCGTTCGCTCGCGGCGTATGTGGGCGTGGAGCACGTGGCTCGTTTTCCCGAGCGCAAGGATTATCCCTGGAAAAGCAACGAGCCGGACGATGCGGTGGTCGCCGCTCGTTGTGCCGCCATGTCGCGTGTTGCCCAGGGCGAATCGTGCATCATGGTCGCCTCCGCGCGTTCGCTGCTGCGCTGCGTCCCGCCGCTCGAGAGCCGTTATTGGCAATCGACCGTCTTTTCGGTGGGGGAGGAGATTCCGTTCGAGCAGGTTCCTGCACGCCTGGTCGGCATGGGGTACACGCGCGCCGACGCAGCCGATGCTCCCGGACTCTTCCGCGTGCAGGGCGATACCGTCGAAATCTGGGCCGCCCAATCCACGGCCCCGGTGCGTATCGAGTTCTTCGGCGATGAGATCGACCGCATCCGCCTCATGGTGGCGTCGACCGGCCAGACGATCGGCGATGAGGAGTCGGTTGAGATAAGTCCCGTTCGCGAGCTCGCCCTCACCGATGATGCGGTGAAACGCATCTCGGAGGCGCTTTATCTTCCCGCGCAGAATGACACGGAGCTTGCGGCGCTGCTCGAGCTCGTGCAGGCGCGCGTGGTCACACCTGAACTCGAGCGGTTCTTGCCGCTGATGTATGGGGGCACGGTGAGCCCGCTCGCGCACGTGCACCGCGATGCGCTCGTGATTCTTTCCGAGCCGCGGTCGTTGTTCGACGATTGCACGCGTGCGTACGAGGATCTTGAGCGCCGTGCCGCCGATGCGAAGGTCACGCGTTTGGACGGCCTCTACGTTCGCCCCCAGGAACTTGATTTCGGGCGACAGCAGCGCCTGAATTACGTGAGCCTCATCCGCGCCGGCGGCCAGGTCACGGCTGAGCTCAAGATCGAGCAGCCGGCGTTGGCAGGCTCCGACAACCGATTCGTCAGTCGTATTCAGGAGGTGGTGAACAACCGCTATGCCTGCGTGTTCGCCATCCCCGATCGCGGGGCGCGCGAGTCGATGGAGCTCTCGTTCACCGATATCTCCGTCCCGTTCGAGGAGTCGCTGCAGGCGGCGCCGGAAAACGCGGGCCATGTGGGATCGGATGTGACCGTCTCCCTGCTCAAGCGAGATGTCGATGCGCTCAACGCACGTGGTCTCGAGGAGGGCTCCGTGGCCGTGCCCACCATCACGCGCGGTCGCGTGACTTTTGTCGACATCCCCATTCCGTCCGGCGTGGTGGTGCCGTCGGCGCATTTGGCTGTGTTCAGTCTGGCCGACCTCAATTCGCGCATGGACGGCAAGCGCGGACGCCCACGTCGTCGCGTGGACATCACCGAGGTGACGTTCCCGTTCAAGCCTGGTGACTACGTGGTTCACGCCACGCACGGTATCGCATTGTTCTCCGAGATCGTTCGCCAGGAGGTGGGCGGCAAGGAGCGCGATTATTTCATGCTGGAGTATGCGGGCGGCGACAAGCTGTACGTGCCGCTCGAGCAGGTCGACCGCATCACGCGCTACGTCGGTCCCGACGGCGACAACCCGCGTCTCACGCGTCTCAACACCGCCGACTGGAGTCGCGCCACCACCAAGGCCCGCAAGAGCGCTAAGAAACTCGCGTTCGATCTGGTCGATCTGTATACGCGCCGCAGCTCCATCACGGGCTTCGCCTTTGGGCCGGACAGCGCGAGCCAGATCGAGATGGAGGAGAGCTTTCCGTACGACGAGACGCGCGACCAGCTCGATGCCATTGCCGACATCAAATCCGACATGGAGTCGACCAAGCCCATGGATCGCCTGCTTTGCGGCGACGTGGGTTTTGGAAAGACCGAAGTCGCCCTGCGTGCCGCGTTCAAGTGCGTCGACGGTGGGCGTCAGGTCATGGTCCTGTGCCCCACGACGATTCTCGCCCAGCAGCATTACGAGACGTTCTTCGAGCGCTTTGCGCCCTTTGGCGTGGAAGTCGAGGTGCTTTCTCGCTTCCGCACGCCCGCGCGGCAGCGCCGCGCGCTGGCCGCGTTTGCCGAGGGTAAAGTCGACGTGCTCATCGGCACGCATCGCCTGCTCTCGGCCGATGTGAACCCGCACGAGCTCGGCCTGGTCATCATCGACGAGGAGCAGCGTTTCGGCGTCCAACACAAGGAGCAGCTCAAAAACATGCGCGAGCAGATCGACGTGCTCACGCTTTCTGCGACGCCCATCCCACGCACCATGCAGATGGCCATGAGCGGGGTGCGCGACATGAGTCTCATCACCACGCCGCCTACCGGGCGCCGCCCGGTTGCTGTGCATGTGGGTGAGTACGATCCGGATGTGGTGAGCGCGGCCATTCGCTTAGAGATTGGGCGTGGCGGCCAGGTCTACTACGTGTCCAACCGCGTGAAGACCATCGACGACGCCGTCGAGCGCGTGCTCGAGGCGGCGCCGGAGGCGCGTATCGGCGTGGCGCACGGTAAGATGAGCCCGCGCGAGGTCGAGGATGTGATGGTGCAGTTCGCCACCAAGAAGATCGATGTGCTCATCGCCACCACCATCGTGGAGAGCGGAATCGACAACTCGAGCGCGAACACCCTCATCATCGAGGACTCGCAGCGCTTGGGCTTGGCGCAGCTCTATCAGCTCAAGGGCCGTGTCGGTCGTTCGGCAACCCAGGCGTACGCGTACTTCATGTTCCCGGGCGAGCTTCCGCTCACCGAGGAGGCCACGGCACGTCTCACCGCTCTCTCCGAGTTCCAGGACCTGGGCAGCGGTATGCGCATCGCCATGCGAGACTTGGAGATTCGCGGTGCGGGTTCGCTCGTCGGCGCCGAGCAGCACGGCAATCTTTCGAGTGTGGGCTTCGACCTGTTCACGCAGATGCTTGGGGCTGCCGTGGCCGAGGCGCGCGGCGAGGGCGGTGCGGACGTGGAGCAGTCGGGCGTTGCCATCAACCTGCCAGCCGACTTTTTCCTGGCAGAGGAGTACGTTCCGGCGGTCGACCGCCGCGTGCTGGCGTATCGAAAGCTCGCTGCGGCCGATATGCTCGAGCAGGTGGACGCGCTGCAACTGGAGTGCGAGGAGACGTTCGGGGCGCTGCCCGAGGCCGCGCAGAACCTGTTCGACCGTACCCGCATCCGCATCCGCGCCGACAGGCTCGGGCTTGAGAGCGTTTCGCTCATCGCGGGCAAGCTCACGTACCAGGGTGTCGACGTTCCCAAGGACGTTGCATTCGAGCTGCGCACCAAGTTGGGGGCCATCGCATTTCCCAAGACGCGTAAGTTCACGGTCCCGTACAAGGTCGGGGCGGGCAATGGCAGCGGTATTGGTCGCGGCATCAACGCAGATGTCTCCAACGGCGGCATCGGGCCCGTTCAGGCGGCGCTGGATATCCTCATCCAGCTCGGCCCCTCGGGAGACGACGACTAG
PROTEIN sequence
Length: 1193
MLIHRIAAQLYTAEALQDIEAALAAGEDATLAISQSGRTLAVAAQFARTPRPTVYIVSGEEAADRAARSLAAYVGVEHVARFPERKDYPWKSNEPDDAVVAARCAAMSRVAQGESCIMVASARSLLRCVPPLESRYWQSTVFSVGEEIPFEQVPARLVGMGYTRADAADAPGLFRVQGDTVEIWAAQSTAPVRIEFFGDEIDRIRLMVASTGQTIGDEESVEISPVRELALTDDAVKRISEALYLPAQNDTELAALLELVQARVVTPELERFLPLMYGGTVSPLAHVHRDALVILSEPRSLFDDCTRAYEDLERRAADAKVTRLDGLYVRPQELDFGRQQRLNYVSLIRAGGQVTAELKIEQPALAGSDNRFVSRIQEVVNNRYACVFAIPDRGARESMELSFTDISVPFEESLQAAPENAGHVGSDVTVSLLKRDVDALNARGLEEGSVAVPTITRGRVTFVDIPIPSGVVVPSAHLAVFSLADLNSRMDGKRGRPRRRVDITEVTFPFKPGDYVVHATHGIALFSEIVRQEVGGKERDYFMLEYAGGDKLYVPLEQVDRITRYVGPDGDNPRLTRLNTADWSRATTKARKSAKKLAFDLVDLYTRRSSITGFAFGPDSASQIEMEESFPYDETRDQLDAIADIKSDMESTKPMDRLLCGDVGFGKTEVALRAAFKCVDGGRQVMVLCPTTILAQQHYETFFERFAPFGVEVEVLSRFRTPARQRRALAAFAEGKVDVLIGTHRLLSADVNPHELGLVIIDEEQRFGVQHKEQLKNMREQIDVLTLSATPIPRTMQMAMSGVRDMSLITTPPTGRRPVAVHVGEYDPDVVSAAIRLEIGRGGQVYYVSNRVKTIDDAVERVLEAAPEARIGVAHGKMSPREVEDVMVQFATKKIDVLIATTIVESGIDNSSANTLIIEDSQRLGLAQLYQLKGRVGRSATQAYAYFMFPGELPLTEEATARLTALSEFQDLGSGMRIAMRDLEIRGAGSLVGAEQHGNLSSVGFDLFTQMLGAAVAEARGEGGADVEQSGVAINLPADFFLAEEYVPAVDRRVLAYRKLAAADMLEQVDALQLECEETFGALPEAAQNLFDRTRIRIRADRLGLESVSLIAGKLTYQGVDVPKDVAFELRTKLGAIAFPKTRKFTVPYKVGAGNGSGIGRGINADVSNGGIGPVQAALDILIQLGPSGDDD*