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L3_069_000G1_scaffold_7798_1

Organism: dasL3_069_000G1_concoct_128_fa

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: 2..4333

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 1443.0
  • Bit_score: 2865
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 85.0
  • Coverage: 1448.0
  • Bit_score: 2455
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9V9_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 1443.0
  • Bit_score: 2865
  • Evalue 0.0

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Taxonomy

Collinsella intestinalis → Collinsella → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 4332
GACGGCCTGTTCTGCGAGAAGATCTTCGGTCCCGCCAAGGACTGGGAGTGCTCCTGCGGTAAGTACAAGGGCATCCGTTTCAAGGGCATCGTCTGCGAGCGCTGCGGCGTCGAGGTGACCACGGCCAAGGTGCGCCGCGAGCGCATGGGCCACATCGAGCTGGCGGCCCCCGTCAGCCACATCTGGTACTTCAAGAGCCCGACCTCGTTCCCGATGAGCCGCATGCTCGACATCAAGTCCAAGGATCTTGAGAAGGTCCTGTACTTCGCGAGCTACATCATCACCCACGTCGACTATGAGGCCCGTGAGGCCGACGCCGACGACCTGCGCGAGGAGCTCGCCGCCGACCTCGAGGAGATCGACGCCGAGTGCGCCCGTCAGATCGAGTCTCTCAAGGAGCAGGGCAACCCCGAGAACTTCGACGAGTTCTCCGATGAGGAGCCTCTGACCCCCGAGGAGATCGCTGCCGGCATCGTCGACATCGAGGAGGAGTGCCGCGACGAGAAGGACCTCCGTTCCGAGGCCTTCCAGGCGTTCATGCAGCTCAACGAGCGCGATCTCGTCTCCGACGAGCCGCTGTTCCGCGAGATGAAGCGCTACTACTCCATGTACTTCAAGGGCGGCATGGGCGCCGAGGCCATCCGTGACCTGCTCGACGCCATCGACCTTCCGCAGGAGGCCGCGACCCTCAAGGCCATCATCGCCGACGAGGACAGCCAGAAGCAGAAGCGCGAGAAGGCCGTCAAGCGCCTCGAGGTCGTCGATGCCTTCCTCAAGGGCGGCAACAGCCCCGCAAACATGATTCTCGACGTGATCCCGGTCATTCCGCCGGATCTGCGCCCGATGGTCCAGCTCGACGGCGGCCGCTTCGCCGCGTCCGACCTGAACGACCTGTACCGTCGCGTGATCAACCGTAACAACCGACTCAAGCGCCTGCTCGACCTGGACGCCCCTGCGATCATCGTGAACAACGAGAAGCGCATGCTTCAGGAGGCCGTCGACGCCCTGTTCGACAACGGCCGTCGTGGTCGCCCGGTCTCCGGCCGTGGCGGTCGCCCGCTGAAGTCGCTGGCCGAGGCCCTCAAGGGCAAGCAGGGCCGCTTCCGCCAGAACCTGCTCGGCAAGCGCGTCGACTACTCCGGCCGTTCGGTCATCGTCACCGACCCGAAGCTCAAGCTGCATCAGTGCGGTCTGCCCAAGACCATGGCCCTGGAGCTGTTCCAGCCCTTCGTCATGAAGCGCCTGACCGAGCTCGGCAAGGTCGAGAACATCAAGGGTGCCAAGCGCGCCATCGAGCGTCGCGCCTCCTTCGTCTGGGACATCCTGGAAGAGGTCATCGACGGCCGTCTGGTGCTGCTCAACCGCGCACCGACGCTGCACCGCCTCTCCATCCAGGCCTTCGAGCCCGTGCTGGTCGAGGGTAAGGCCATTCACCTGCACCCGCTCGTCTGCGCCCCGTTCAACGCGGACTTCGACGGCGACCAGATGTCCGTCCACGTTCCGCTGTCCGTCCAGGCCCAGGCCGAGGCTCGCATCCTGATGATGAGCTCCAACAACCTGCGCTCCCCGGCTTCCGGTAAGCCCGTGAACATTCCTTCCCAGGACATGATCATCGGCGTGTACTACCTGACCCAGGCTCGCGACGGCATGGCCGGCGAGGGCCATGTCTTCGCCAGCTTCGACGACGCCCTGCGCGCCTACGACTGCCGCGCCGAGGCCGGCGTCGACCTGCAGGCGAAGGTCCAGGTCCGCGTTTCCGAGGCCGAGGCCAACGTCGAGCTCGAGGACGGCACCAAGCTCTTCCGCGTGAAGACCGGCAAGAACTCCATCGAGGACTACGACGTGACCGGTTCCAAGACCGCTCGCTTCGAGACCACGATCGGCCGCATCATCTTCAACCGTCAGTGCCTGCCGGCCGACTACGAGTTCATCAACTACAAGATGGTCAAGGGTGATATCGCCAAGCTCGTCTCCGACTGCTGCGATCGCTACCCCGAGGCCGAGGTCGCTCCGATCCTCGACGCCATCAAGTACTCCGGCTTCCACTACGCCACCATGTCCGGCCTCACCATCTCCGTGTGGGACGCCCTGATCCCGGACGACAAGTGGCAGGTCCTCGATCGCGCCCAGAGCAACGTCGACCAGATCAACGCGTACTTCGAGGAGGGCTTCCTCAACGAGATGGAACGCCATATCGAGGTCGTTAACGAGTGGACCGCCGCCACCGACGAGGTCGCTTCCAAGATGCTGTCCATGTTCGACGAGGAGAACCCCATCTACATGATGGCCGACTCCGGTGCTCGAGGCTCCAAGGCCCAGCTGCGTCAGCTCGGCGGCATGCGCGGCCTGATGGCGGACATGTCCGGTGAGACCATCGACCTTCCCATTAAGGCGAACTTCCGCGAGGGCCTGCTCCCGCTCGAGTACTTCATCTCCACCTACGGCGCTCGTAAGGGCCTCGTCGATACCGCTTCGCACACCTCCGACTCCGGTTACCTCACCCGTCGACTCGTCGACGTGGCTCAGGACGTCATCGTGCGCGAAGAGGACTGCGGCACCACCGAGGGCTGCGCGTACAACCTCATCATCCCCGGCACCGAGGACCTCAACGCCGACCTCGTGGGCCGTTGCTTCCTGGACGACGTCGTCGCCCCGGATGGCACCGTGCTCTTCGAGAAGGATGCCTACATCACCTGCGTCGACGACCTCCAGAAGATGGTCGACGCCGGCCTCAAGAAGGTCTCCCTGCGCGCGCTGCTGACCTGCCGCTCCAAGTACGGCGTCTGCCAGAAGTGCTACGGCTGGGATCTGTCCACCCGTCGCCCGGTTGCCATCGGCACCGCGGTCGGCATCATCGCCGCCCAGTCCATCGGCGAGCCCGGCACCCAGCTTACGATGCGTACGATTCACTCCGGCGGCGTCGCTGGCGTTGCGGACATTACCCAGGGTCTCCCGACCGTTTCCCGTATGTTCGACATCGTCGGCAACGTCAACGAGAAGATTCTCGGTCGCGAGGCCGATCTGGCCCCGTTCTCCGGTCACCTCGCCATCAAGCCCGAGAAGTCCGAGTACGTGCTCACGCTCACCGACACGGACGACCCGAGCCGCATCCTGGACGAGAAGCGCGTCCCCGCTGCCGTCCAGTTCATGCCCGGCATCGAGGATGGCTGCGAGGTCCGCGCCGGTGACCAGATCACCAAGGGCTTCGTCAACTTCCGCAACCTGCGCCAGCTGACCGACATCGAGTCCACGATGCACACGTTCGTCGAGAACGTGAAGGAGGTCTACAACTCTCAGGGCGTCGACCTCAACGACAAGCACATCGAGGTCATGGCTCGCCAGATGCTGCGCCGCGTCCAGATCACCAATCCCGGTGACTCCAAGTACCTGCTCGGCCAGTACGTCGATCGCTACGAGTTCGCCGACGAGGTCGAGCGCGTGGCTCGCGAGGGCCTCAACCCGCCTGCGGCCGAGCCCGCGATCCTGGGTACTCTCAAGGTCGCTTCCTCGATCGACTCCTGGCTGTCCTCCGCGTCGTTCATCCGCACCGCGGGCGTGCTCACCGAGGCCGCCATCGAGGGCAAGGTCGACCACCTGCTCGACCTCAAGTCCAACGTCATCGTGGGCAAGAAGATCCCTGCGGGTACCGGCCTCAAGCCGTATGCCAAGGCCGGCATGACCTACCGCACCGAGGAGGGCTACGTCCCGGTGGACAACCCGTCCTCTCCGCACGCCAAGGTCCTGCCCGAGTGGGCTCCGGAGGAGCTCAAGGAGCTCGATACCGTCCTGCCTCAGCAGCTCGACTTCGGCGGAGGCGACTTCTCGGCCGACGGTGGTCACATCACCCGTAACGGCCGTACCATCTCCGCCGAGGATGCCCGTCTGTACCTCTTCGACGACCTGGGCGTGTCCCAGCGTTGGACCAACAAGTTCAGCGAGGTCGGCATCGAGGTCGTCGGCGACCTGGTTGGTAAGTCCGAGGAGGACCTGCTCCGCATCGACGGCATCGGCGCCAAGGCCATCGAGGAGCTCCGCGACGGCCTGGAGGAGCACAACCTCCTCTACATCCTCGAGAACACCGAGGACGTCGCCGACGAGGAAGATCTCTCTCAGCTGCTGCAGATGGTCTTCTCCCCGGATGGCCCCGACGACATCCTGCTCGGCACGAGCGCCCCGCGTCATCACCTCGATACCGATGAGGAGATGATCGGTGCCCCGGCCCAGTCCAAGGATGGCAACGGCGTCATCAACGAGGACATGGCCTCCCTCGACGAGCTGCTGAACAAGCTCGTCGACACCGATGAGGTCTATCCCGAGGAGCAGGAGGATTAG
PROTEIN sequence
Length: 1444
DGLFCEKIFGPAKDWECSCGKYKGIRFKGIVCERCGVEVTTAKVRRERMGHIELAAPVSHIWYFKSPTSFPMSRMLDIKSKDLEKVLYFASYIITHVDYEAREADADDLREELAADLEEIDAECARQIESLKEQGNPENFDEFSDEEPLTPEEIAAGIVDIEEECRDEKDLRSEAFQAFMQLNERDLVSDEPLFREMKRYYSMYFKGGMGAEAIRDLLDAIDLPQEAATLKAIIADEDSQKQKREKAVKRLEVVDAFLKGGNSPANMILDVIPVIPPDLRPMVQLDGGRFAASDLNDLYRRVINRNNRLKRLLDLDAPAIIVNNEKRMLQEAVDALFDNGRRGRPVSGRGGRPLKSLAEALKGKQGRFRQNLLGKRVDYSGRSVIVTDPKLKLHQCGLPKTMALELFQPFVMKRLTELGKVENIKGAKRAIERRASFVWDILEEVIDGRLVLLNRAPTLHRLSIQAFEPVLVEGKAIHLHPLVCAPFNADFDGDQMSVHVPLSVQAQAEARILMMSSNNLRSPASGKPVNIPSQDMIIGVYYLTQARDGMAGEGHVFASFDDALRAYDCRAEAGVDLQAKVQVRVSEAEANVELEDGTKLFRVKTGKNSIEDYDVTGSKTARFETTIGRIIFNRQCLPADYEFINYKMVKGDIAKLVSDCCDRYPEAEVAPILDAIKYSGFHYATMSGLTISVWDALIPDDKWQVLDRAQSNVDQINAYFEEGFLNEMERHIEVVNEWTAATDEVASKMLSMFDEENPIYMMADSGARGSKAQLRQLGGMRGLMADMSGETIDLPIKANFREGLLPLEYFISTYGARKGLVDTASHTSDSGYLTRRLVDVAQDVIVREEDCGTTEGCAYNLIIPGTEDLNADLVGRCFLDDVVAPDGTVLFEKDAYITCVDDLQKMVDAGLKKVSLRALLTCRSKYGVCQKCYGWDLSTRRPVAIGTAVGIIAAQSIGEPGTQLTMRTIHSGGVAGVADITQGLPTVSRMFDIVGNVNEKILGREADLAPFSGHLAIKPEKSEYVLTLTDTDDPSRILDEKRVPAAVQFMPGIEDGCEVRAGDQITKGFVNFRNLRQLTDIESTMHTFVENVKEVYNSQGVDLNDKHIEVMARQMLRRVQITNPGDSKYLLGQYVDRYEFADEVERVAREGLNPPAAEPAILGTLKVASSIDSWLSSASFIRTAGVLTEAAIEGKVDHLLDLKSNVIVGKKIPAGTGLKPYAKAGMTYRTEEGYVPVDNPSSPHAKVLPEWAPEELKELDTVLPQQLDFGGGDFSADGGHITRNGRTISAEDARLYLFDDLGVSQRWTNKFSEVGIEVVGDLVGKSEEDLLRIDGIGAKAIEELRDGLEEHNLLYILENTEDVADEEDLSQLLQMVFSPDGPDDILLGTSAPRHHLDTDEEMIGAPAQSKDGNGVINEDMASLDELLNKLVDTDEVYPEEQED*