ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

L3_069_000G1_scaffold_27431_1

Organism: dasL3_069_000G1_concoct_128_fa

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: comp(3..1700)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed DNA polymerase {ECO:0000313|EMBL:EEP45226.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EEP45226.1};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 564.0
  • Bit_score: 1073
  • Evalue 0.0
DNA-directed DNA polymerase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F7K3_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 564.0
  • Bit_score: 1073
  • Evalue 0.0
DNA polymerase I similarity KEGG
DB: KEGG
  • Identity: 61.3
  • Coverage: 568.0
  • Bit_score: 682
  • Evalue 6.80e-194

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Collinsella intestinalis → Collinsella → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1698
CTCATGCACCGCGCCTTCCATGCCGTGCCGCCCACCATGAACGCGCCCGACGGCCGCCCCACCAACGCGGTCTTCGGCTTTCTCAACATGTTCCTCAAAATGGTCGACGAGTTCACGCCCGACGGCGTGGTCTGCGCCTTCGACAAGGGTCGTCCGAAGGTCCGCATGGAGATGCTGCCGCAGTATAAGGCGCAGCGCCCGCCCATGGATCCCAACCTGCGCAGTCAGTTCCCCATGATCAAGGAGCTGCTCGCGAGTCTGTCCATTCCCGTTGTGGAGCTCGAGGGCTGGGAGGGCGACGACATTCTGGGGACGCTTGCCCGCCGCGGTGAGGCCGCCGGGTGCGACATGTACCTCGTCACCGGTGACCGCGATATGTATCAGCTCGTGACCGACCACGTGCACGTGGTGTCCACCCGCAAGGGCCTGTCCGACATCGCCATCATGACGCCCGAGAGCGTCGATGACCTGTACCACGGCATCACGCCTGAGCTCGTGCCCGACTTCTACGGCCTCAAGGGCGACTCTTCCGACAACATCCCCGGCGTGCCCGGCATCGGCCCCAAGAAGGCGAGTGCCCTCATCGCGCAGTACGGCAACCTCGACGAGGTCATCGCCCATGCCGACGAGGTCAAGGGCAAGATGGGCGAGAATCTACGCGCCCACATCGACGATGCACTCATCTCCCGCAAGATCGCGACGATCATGACGGACGCGCCCATCGAGTGCGACCTGACCGAGGTGGCGTTCCCCGCCTTCGACGCGGCTGCCGTTTCCGCCGCTTTGGGCGGAATCGGCATCATGGCCATGCAGAACCGTTTCCTCGCCCTGTTGGGCGAGGGCGCTGCAGCGGCTCCCGCCGCGGCGAGCCTCGAGATGCCCGAGGTTCTGCGGGTGGCCCTCGATGCGTCATCGGCGTTCGATGAGGCCAGGTATGCTCGCGAGCATGAGGAGATGAGCGCGTGTTTCGACGAGCTGTCCCGTGCGCTTGAGGCGGGTGAGTGGCTCGGTGTGTCCATGGAGGACGACAAGGAGGCCGACGCGCTCTTTGGCATGACGCGTCGCCTGTGGGTCGCCACCGATCGAGCCCTGTTGTCGTTCGAGGAGCCCCTCGGCCCCTGTGCGATCTTCACGACCGATTTCGATCTTTCCGCAGGCGTCATCCCGGGCGTTCTCAAGCTCGTCTTGACAGAGGGGCACGTTGCTTCCTCCGATATCAAGGCGCTGCTCCACGAGCTGTCGCCGGTCGATTCGAGTGAGGCCGAGCTGCTTGATCCCCTGGCGGTGGATTCCGCTCGCCTGTTCGATACCGTGGTCGCCGCATATCTGCTCGATTCGGTGCGCTCTGACTTCACCGACGCCTACCTGGCCGAGACCTACTTGCATGCGTCCTTGCCGTCTGCGGCGGGGGAGGACGGTGCCCCTGTGGACGCAGTGAGCATCGCCGCACGTGGGGCCTGGCTCGCCCGCACCCTGCGCGAGCCACTCGCCTCGGCGCTCGAAGCCCAGGGGGCGGATGCCATCTTCACCAAGATCGAGATGCCGCTCGTACGCGTCCTTGCCTCCATGGAGCGCGCGGGCATGTACGTCGACCCTGCTCGCCTCGCCGCACAGTCGGATGAGCTCGTCGGTCAGATTCAGGCGCTCGAGGCGCGTATTCGTGAGCTCGCCGGCGGCGAGGAGTTCAACTTATATCAG
PROTEIN sequence
Length: 566
LMHRAFHAVPPTMNAPDGRPTNAVFGFLNMFLKMVDEFTPDGVVCAFDKGRPKVRMEMLPQYKAQRPPMDPNLRSQFPMIKELLASLSIPVVELEGWEGDDILGTLARRGEAAGCDMYLVTGDRDMYQLVTDHVHVVSTRKGLSDIAIMTPESVDDLYHGITPELVPDFYGLKGDSSDNIPGVPGIGPKKASALIAQYGNLDEVIAHADEVKGKMGENLRAHIDDALISRKIATIMTDAPIECDLTEVAFPAFDAAAVSAALGGIGIMAMQNRFLALLGEGAAAAPAAASLEMPEVLRVALDASSAFDEARYAREHEEMSACFDELSRALEAGEWLGVSMEDDKEADALFGMTRRLWVATDRALLSFEEPLGPCAIFTTDFDLSAGVIPGVLKLVLTEGHVASSDIKALLHELSPVDSSEAELLDPLAVDSARLFDTVVAAYLLDSVRSDFTDAYLAETYLHASLPSAAGEDGAPVDAVSIAARGAWLARTLREPLASALEAQGADAIFTKIEMPLVRVLASMERAGMYVDPARLAAQSDELVGQIQALEARIRELAGGEEFNLYQ