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L3_069_000G1_scaffold_121_30

Organism: dasL3_069_000G1_metabat_metabat_62_fa_fa

near complete RP 47 / 55 BSCG 50 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: comp(33404..34813)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DDV0_CLOTH similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 351.0
  • Bit_score: 520
  • Evalue 1.30e-144
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 351.0
  • Bit_score: 520
  • Evalue 3.70e-145
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 351.0
  • Bit_score: 520
  • Evalue 1.80e-144

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Taxonomy

Ruminiclostridium thermocellum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1410
ATGGGCGGTAAACATGAAGAAGCTGATAAGAAATTAACAGACGATTTTGAATTCGAAGATGAATTTGAAGAGGAAACCAATGAATTCGAAGAGGAATTGCCAGATGATGCGGAAGACACTGAGGATCCGGATGTTTTTGAAATAGAAGAACCAGAGAATCTTGATGGCATCGAGGAACCCCTGGACTTCGATGTAGATGTAGACACCGTAGACGAAATTCCAGGAGAAGAAATCGATGATTTCAGCGAGCCGGTTCCGCAGCCTTTTGAAAATCAGAGCATCAATTATGAAGACAGCGAGTATAGTACCGGTAATTCCCTGCTTTCGAAAGAAGACAAGGCGCTGTTCAATGATAATCCTTTAATTATTGGCCTCTTCGAGCGTGGCAAGATCAAAGGCGCATTGACATTTGATGAAATCAATTCTGTCTTAGATGAATCGGACCTTGAATCTGATATCATCGACAAAGTATATGAAGTTGCAGAGCGTGTCGGACTCAACATTGTAGGTGATTTCGATGGCACGCAGGAAGAGAGTGGAAAGCAATATACAGAAGATCTAGAATCGCTTGCAGAAGGGGTCGGACTTGAAGACCATGTCCGGATGTATCTAAAAGAAATTGGAAAAGTGCCACTGCTTACGGCGGAGGAAGAAGTTGAACTTGCCATCCGGATTGAAAACGGAGACGAAACGGCGAAGGACAGGCTGAATGAAGCAAATCTCAGGTTGGTAGTTAGCATCGCAAAACGTTATGTGGGAAAAGGAATGCAATTTTTGGATCTGATACAGGAAGGAAACCTCGGTCTCTTAAAAGCTGTAGAAAAATTTGACTACCGGAAAGGGTATAAATTCAGTACTTATGCTACCTGGTGGATTCGACAGGCGATCACACGCGCGATTGCAGATCAAGCGCGGACGATCCGAATTCCAGTGCATATGGTGGAAACAATTCATAAACTTGGCCGTGTTTCACGACAGCTTTCTCAGGAACTCGGAAAAGATCCTACTCCAGAACAAATTGCACAGGAAATGAACATGCCAGTCGATAAAGTGCGTGAAATTATGAAAATTTCTCAGGATCCTGTTTCACTGGAAACTCCAGTGGGAGAAGAAGAAGACAGTCATATCGGTGATTTCATTCCGGACGATGATGCGCCTGCGCCTTCTGAAAGTGCGGCAGCAATTTTACTGCGGGAACAGCTGATGGAGGTCTTAGAAACACTCACGCCGAGAGAGCAAAAAGTTCTGAAACTTCGTTTTGGACTGGATGACGGATGCCAGAGAACACTGGAAGAGGTAGGCAGAGAGTTCCATGTTACGAGAGAGCGGATTCGTCAGATTGAGGCAAAAGCACTCCGAAAATTACGGCATCCGAGCCGCAGCAAGAAATTAAAAGATTATATCGACTAA
PROTEIN sequence
Length: 470
MGGKHEEADKKLTDDFEFEDEFEEETNEFEEELPDDAEDTEDPDVFEIEEPENLDGIEEPLDFDVDVDTVDEIPGEEIDDFSEPVPQPFENQSINYEDSEYSTGNSLLSKEDKALFNDNPLIIGLFERGKIKGALTFDEINSVLDESDLESDIIDKVYEVAERVGLNIVGDFDGTQEESGKQYTEDLESLAEGVGLEDHVRMYLKEIGKVPLLTAEEEVELAIRIENGDETAKDRLNEANLRLVVSIAKRYVGKGMQFLDLIQEGNLGLLKAVEKFDYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETIHKLGRVSRQLSQELGKDPTPEQIAQEMNMPVDKVREIMKISQDPVSLETPVGEEEDSHIGDFIPDDDAPAPSESAAAILLREQLMEVLETLTPREQKVLKLRFGLDDGCQRTLEEVGREFHVTRERIRQIEAKALRKLRHPSRSKKLKDYID*