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L3_072_000M1_scaffold_9314_2

Organism: dasL3_072_000M1_concoct_101_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: comp(536..1309)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6HIH3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 256.0
  • Bit_score: 328
  • Evalue 4.00e-87
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.7
  • Coverage: 256.0
  • Bit_score: 328
  • Evalue 5.60e-87
RNA polymerase sigma subunit RpsG/SigG similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 254.0
  • Bit_score: 308
  • Evalue 1.20e-81

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Taxonomy

Firmicutes bacterium CAG:552 → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 774
ATGTCGGCAAGGATAAATATTTGCGGAATAGATACTTCGACTCTTCCGAAATTAAGTCACGATCAACAGATGAAACTGCTCAATGAAGCAAGAAACGGCTCGAAGGCAGCCCGCGAAAGGTTTATTATGGCAAACCTAAGGTTGGTTTTAAGCGTAATTCAGCGTTTTTACTCAAACAAAGACAATGCAGACGATTTGTTTCAAGTCGGCACCATAGGGCTTATTAAAGCCATGGATAATTTCGACACTACTCTGGCACTAAGGTTTTCGACGTACGCGGTACCGATGATAATCGGCGAAATACGAAGATACATGCGCGACAGTTCGCCGGTGCGCGTCAGCAGATCGCTTCGCGACACGGCATATAAGGTAATTTCCACTCGACAGCAAATAGAAGCGGAAAGCGGCAAAGAAGCTTCTCTTCGTGAAGTTGCCGCGGCACTCGGCATTGCCGAAGCCGACGCCAAAGACGCGCTCGACGCAATAAGCGACCCCATATCGCTGTTCGACCCGGTATATCACGACGGCAACGAAACAGTTCTTATAATGGAACAAATAAGCGACAAGAAAAACAACGATGAAAAATGGTTAAACTCGGTAACGTTGGGCGACGCAATCAAAAAGCTTGACGAACGCGAAAAAAACATACTCATGATGCGCTTTTATCAGGGAAAAACTCAGGTTGAAGTATCGGACGAAATTGGTATATCGCAGGCTCAGGTTTCAAGATTGGAAAAAAATGCTAAAAAAGCGTTAAAAAAATATATCGAATAA
PROTEIN sequence
Length: 258
MSARINICGIDTSTLPKLSHDQQMKLLNEARNGSKAARERFIMANLRLVLSVIQRFYSNKDNADDLFQVGTIGLIKAMDNFDTTLALRFSTYAVPMIIGEIRRYMRDSSPVRVSRSLRDTAYKVISTRQQIEAESGKEASLREVAAALGIAEADAKDALDAISDPISLFDPVYHDGNETVLIMEQISDKKNNDEKWLNSVTLGDAIKKLDEREKNILMMRFYQGKTQVEVSDEIGISQAQVSRLEKNAKKALKKYIE*