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L3_072_057G1_scaffold_566_15

Organism: dasL3_072_057G1_concoct_10_fa

near complete RP 50 / 55 MC: 7 BSCG 49 / 51 MC: 2 ASCG 13 / 38
Location: 6701..7588

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1158602 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus raffinosus ATCC 49464.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 296.0
  • Bit_score: 576
  • Evalue 1.40e-161
DNA-directed RNA polymerase subunit alpha n=20 Tax=Enterococcus RepID=R2RE03_9ENTE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 296.0
  • Bit_score: 576
  • Evalue 9.70e-162
rpoA; DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 96.3
  • Coverage: 296.0
  • Bit_score: 557
  • Evalue 1.30e-156

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Taxonomy

Enterococcus raffinosus → Enterococcus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 888
ATGATTGAATTCGAAAAACCAAGAATCACAAAAATTGATGAAGACAGAGATTATGGCAAGTTCGTTGTTGAACCTTTGGAAAGAGGTTATGGAACTACTTTAGGTAATTCTCTACGTCGTATTCTACTTTCTTCTTTACCAGGCGCTGCCATTACCAATATTCAAATCGATGGGGTGTTACACGAATTTTCAACCATCAAAGGTGTAAGAGAAGACGTTGTACAAATCATCTTGAATATCAAAGGTTTAGCGTTGAAATTATTTGCGGAAGAAGAAAAAACCCTTGAGATCGATATTACTGGACCAGCTACGGTAACTGCCGGCGATATTATCGTTGACAGCGACGTTGAAATCTTAAATAAAGATATGTACATTTGTACTGTTGCTGAAGGCGCAACATTCCATGCTCGCCTAACGGTAAAACCTGGTCGAGGCTATGTTCAAGCAGACGAAAATAAAAAGGAAGATATGCCAATCGGTGTGCTTCCAGTCGATTCTATTTACACACCTGTACGTAAAGTCAACTATCAAGTTGAAAATACGCGTGTTGGTCGTCGTGATGACTTCGATAAATTAACGATGGAAATTTGGACTGACGGATCTATTATTGCTCAAGAAGCATTAAGTCTTGCAGCAAAAATCTTAACAGAACATTTAGATATTTTTGTAAATCTTACTGATGAAGCTAAAAATGCTGAAATCATGGTTGAAAAAGAAGAAACTCAAAAAGAAAAAATGTTGGAAATGACCATCGAAGAACTAGACTTGTCTGTACGTTCGTATAATTGTTTGAAACGCGCTGGTATTAACACGGTTCAAGAATTAACGAATAAGTCCGAACCTGAAATGATCAAAGTACGTAATTTAGGACGTAAATCACTTGAAGAA
PROTEIN sequence
Length: 296
MIEFEKPRITKIDEDRDYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAITNIQIDGVLHEFSTIKGVREDVVQIILNIKGLALKLFAEEEKTLEIDITGPATVTAGDIIVDSDVEILNKDMYICTVAEGATFHARLTVKPGRGYVQADENKKEDMPIGVLPVDSIYTPVRKVNYQVENTRVGRRDDFDKLTMEIWTDGSIIAQEALSLAAKILTEHLDIFVNLTDEAKNAEIMVEKEETQKEKMLEMTIEELDLSVRSYNCLKRAGINTVQELTNKSEPEMIKVRNLGRKSLEE