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L3_102_363G1_scaffold_1947_4

Organism: dasL3_102_363G1_concoct_29_fa

partial RP 35 / 55 MC: 6 BSCG 40 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 2832..6122

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 1096.0
  • Bit_score: 2139
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Veillonella sp. HPA0037 RepID=S2ZTC9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 1096.0
  • Bit_score: 2139
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 1098.0
  • Bit_score: 1845
  • Evalue 0.0

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Taxonomy

Veillonella sp. HPA0037 → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3291
ATGGATACTTCAATTGATACACTGCTTTCACAAAACCCATCTATGACAGATGGGCTAAAGGCGTTTCGCCAAAAGGGAAAGTCAGTTATATATGGTTTAAGTGGATCACAAAAGTCGTTCCTCTTAAGCCGTGCTATTCCAGAGGAACAAGTACAATCTATTATTATCGTGGTGCACGATAAAGAACATAAAGAATTGTGGGAACGAGATTTAGCGTTTTTCTGGCCTAATGTGCAGGTATTGCCATTTCCCATTACAGAACGTGTAGAATTTACTACCGTAGCTCATAGCCTTGAAGGACAAGGGGCTCAAATGCGAGCGCTCAGTATGTTGGCCTGGAATCGTCCTGTTGTAGTCCTCGCTACAATAGAAGAGGCCACGCAATATGTAGTGAGTCCTCAATATGTTATATCTCAAAGTGTGCATCTTGAGGTTTCTCAATCTATAGAGCGAGATGAGCTGTTAGAAAAATTAGTTACAATTGGATATGAACGCGTAGACCAGGTAGAACAACGTGGTCATTTTTCTGTGCGCGGAGATATTTTTGATATCTTCCCTGTGAATAGTGATGATCCAATACGTATGGAATTCTTTGGCGATGAAATCGACACGATGCGCCATTTCTCCGTAGATACACAACGGTCTATTGAAACGGTGGATTCCTATACGGTGACGCCATTCTTTTTAACCAGTGATGATGCAGACAGTACATTGCTATCCTATGCAAAGGATGGACTTATCATTTATGATGAACCGGTGCGCATTCAAGAAGCGTTGAAGAAATTCTTAAAGGAAGATGCAGCACATCGCAAGCAACATTGTGAATGGTCTGAATTGCAACGCTCTGTAGATGCTAAGATTGAGGTGGCTTTCACATTCATGCAACAGCGTTCTATAGGGCTAGCTGGATTTTATCCGATTGGCATTCAAGGCAAAACGATGACGAGCTTTGAGCGTCAAATTCCGTTGTTGATGGATGAAATCAAGCAGTGGCAAAAGCTAGGCAATCAAGTTGTGCTTGTGATTAATAATTTGCAGCGCCGTGAAGGCATTGAAAAGGCTTTGCATGGTGATGCCATTCCGTATAAGCTTTGTGAAAGCTGGAATTTTGAGCCTAATATAGTTCACGTTATGCAAGGCTTATTAACAGATGGTTTTGAATTACCGCATAGCCGTTTAGTTGTCGTTGTAGAAGGCAATATTTACGGGCAGCAAAAACGCAAACTTCGCAATAAGCCTAAAAAGGGCCAAGAAATTAATTATTTCACGGATTTATCAATCGGCGATTACGTTGTTCACAGCATGCATGGTATCGGTAAATATGTGGGCTTAAAAACGATTGAAACAGAAGGTATCCATCGAGACTACATTGAAATTGCTTATGCCGGAACAGATAGACTGTATTTGCCTGCTAGTAATTTAGATCAATTGCAAAAGTACATCGGCAATGAAGGTGATGTACCTCGCATTCATAAGATGGGTGGTAGCGATTGGCGTAAAGCGGTTACAAAGGCACAGAAATCCATTGATGATTTGGCGGATAAGCTAGTTGAACTGTATGCGAAACGGGAAATTACAGAAGGATTTGCGTTCTTGCCGGATCAACCGTGGCAACAAGAATTTGAAGATGCCTTTCCTTATGAGGAAACAGAGGACCAATTACAAGCTACGCGAGAAATTAAAGAATCCATGGAACGACCAACACCGATGGATCGCTTGTTAGCGGGGGATGTGGGCTTTGGTAAAACAGAGGTCGCTATGCGTGCCATCTTTAAGGCCGTTGTGAGCGGTAAGCAAGTGGCCGTATTGGTACCAACTACTGTATTAGCTCAGCAACATTACCAAACGTTTTTAAATCGATTTAATCCATTTGGTGTAAAGGTAGATGTACTCAATCGATTCCGTTCTACAGCGGAGAAGAAAGAGGTGCTAAAGGGCGTCGAAAATGGTTCTATCGATATCTTAATCGGCACGCACTCCTTGTTAAATAAAAAGGTAAAATTCAAAGATTTAGGGTTCCTCGTCGTAGATGAAGAACAACGTTTTGGCGTTGCACAAAAGGAAAAATGGAAGGAATGGGCTAGTACTATTGACGTCCTTACCTTAAGTGCGACACCTATTCCACGGACACTTCATATGTCTCTTGTAGGTGTTCGTGAAATGTCGGTCATTAGTACACCTCCAGAGGATCGACTACCAGTACAGACCTATGTAGTAGAATACGATATGAATCTCATAGCTGATGCAATTAAACGAGAACTTGCTCGAGGGGGACAGGTTTACTTCGTGTATAATCGGGTAGCATCGATTAATCATATGGGTGAACTATTAGAACAGGCGTTGCCAGATTTGCGTTATGCTGTTGCACATGGACAGATGACAGGCCGTCAAATCGAAGAAATTATGACCGATTTCTATGAAGGTCATTATGATGTATTGCTCAGTACAAGCATCATTGAAACAGGCCTTGATATACCAAATGCCAATACGATTATCATATACGATGCGGATCGTTTAGGCTTATCTCAACTCTATCAAATGCGTGGCCGTGTAGGTCGGTCTAGACGACGCGCCTATGCATATTTCATGTATCGACCTGATAAGATGCTTTCAGAAGCGGCAGAAAAACGTTTAAAAGCCATCGAAGAATTCACAGAATTAGGAGCGGGATTTAAACTGGCTATGCGCGATTTGGAAATTCGTGGGGCTGGTAATCTATTAGGTTCACAACAACATGGTAATATCGCATCGGTCGGCTTTGGTATGTATGTATCCATGTTAGAGGAAGCCATTGCGAAAGCACAAAATAAAGAGGTTGTCAAAGAGGTAGTACCAGATCCTGCCATTGACCTTGAAATTGATGCTTTCATAGATGATGCCTATATCAAGGATAGTGCGCGCAAGATTTCCGTATATCAACGAATGTTACAAGTTAAGAATAAAGCGCAGCTTGATGATTTGACGGACGAACTTATCGACCGTTTTGGTACACCAACGGATCCGGTAGATCGTTTACTACGAGTCGCTCAAATTAAGGAACAGGCTCGTTTGTTGGGGATTAAGAGCATCGTTCGTCGCGAGGGTCAGCTCATCATCCATTGGCAAGATGATTCAAAAATGGCCGATTGGGATATGGGTGCTGTTCGCGAAGATTTATGGAAGAAAATGAAGTTCATGGACACAAAACCTGCGTCATTATACATCAGTTTGAATGGATTAAAGGAATCTATTTTAACGATTACAGAAGCGGTGATGAAGGAGTTGTCAAAGAAATCTAAGGGGGGCCTATGA
PROTEIN sequence
Length: 1097
MDTSIDTLLSQNPSMTDGLKAFRQKGKSVIYGLSGSQKSFLLSRAIPEEQVQSIIIVVHDKEHKELWERDLAFFWPNVQVLPFPITERVEFTTVAHSLEGQGAQMRALSMLAWNRPVVVLATIEEATQYVVSPQYVISQSVHLEVSQSIERDELLEKLVTIGYERVDQVEQRGHFSVRGDIFDIFPVNSDDPIRMEFFGDEIDTMRHFSVDTQRSIETVDSYTVTPFFLTSDDADSTLLSYAKDGLIIYDEPVRIQEALKKFLKEDAAHRKQHCEWSELQRSVDAKIEVAFTFMQQRSIGLAGFYPIGIQGKTMTSFERQIPLLMDEIKQWQKLGNQVVLVINNLQRREGIEKALHGDAIPYKLCESWNFEPNIVHVMQGLLTDGFELPHSRLVVVVEGNIYGQQKRKLRNKPKKGQEINYFTDLSIGDYVVHSMHGIGKYVGLKTIETEGIHRDYIEIAYAGTDRLYLPASNLDQLQKYIGNEGDVPRIHKMGGSDWRKAVTKAQKSIDDLADKLVELYAKREITEGFAFLPDQPWQQEFEDAFPYEETEDQLQATREIKESMERPTPMDRLLAGDVGFGKTEVAMRAIFKAVVSGKQVAVLVPTTVLAQQHYQTFLNRFNPFGVKVDVLNRFRSTAEKKEVLKGVENGSIDILIGTHSLLNKKVKFKDLGFLVVDEEQRFGVAQKEKWKEWASTIDVLTLSATPIPRTLHMSLVGVREMSVISTPPEDRLPVQTYVVEYDMNLIADAIKRELARGGQVYFVYNRVASINHMGELLEQALPDLRYAVAHGQMTGRQIEEIMTDFYEGHYDVLLSTSIIETGLDIPNANTIIIYDADRLGLSQLYQMRGRVGRSRRRAYAYFMYRPDKMLSEAAEKRLKAIEEFTELGAGFKLAMRDLEIRGAGNLLGSQQHGNIASVGFGMYVSMLEEAIAKAQNKEVVKEVVPDPAIDLEIDAFIDDAYIKDSARKISVYQRMLQVKNKAQLDDLTDELIDRFGTPTDPVDRLLRVAQIKEQARLLGIKSIVRREGQLIIHWQDDSKMADWDMGAVREDLWKKMKFMDTKPASLYISLNGLKESILTITEAVMKELSKKSKGGL*