ggKbase home page

L3_105_000G1_scaffold_800_11

Organism: dasL3_105_000G1_metabat_metabat_7_fa_fa

near complete RP 49 / 55 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(13837..17325)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 1162.0
  • Bit_score: 2299
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 84.9
  • Coverage: 1169.0
  • Bit_score: 2001
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9W0_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 1162.0
  • Bit_score: 2299
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Collinsella intestinalis → Collinsella → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3489
GTGCCGAAAGCAAACGCCACACAGACCGTGACCGCCACCGAGCGCACACGCGTCAACTTCGGGAAGATCCCGGAGACGATGGAGCTGCCGAACCTCATCTCCGTGCAGAAGGAGAGCTTCGAGCGCTTCATGGACGAGGGCCTGCGCGACGCCTTCAAGGAGTCCAGCCCCATCCAGAGCCAGAACCACCAGCTCGAGGTGACCTTCGGTCACCATCAGTTCGGCGACCCGTCCCACACCGTGGACGAGTGCCGTGAGAAGGACATGACCTATCAGGCCCCGCTTCTGACCGAGGTCCGTCTGACCAACCTCGAGACGGGCGAGATCAAGGAGCAGCTCGTCTTCATGGGCGACTTCCCCATGATGACCGACCAGGGCACCTTCATCATCAACGGCACCGAGCGCATCGTCGTCTCCCAGCTCGTCCGCTCCCCGGGCGTGTACTACGGCTCCGAGATGGACGGCGGCAAGCAGGTCTACAAGGCCCAGGTCATCCCGGCCCGCGGTGCTTGGCTCGAGTTCGAGGTCGACAAGCGCGACCAGCTCGTGGTCTCCATCGACCGCAAGCGCAAGCAGTCCGCCACCATGTTCCTGCGCGCGCTGGGCATCGCCGTCACCAACGACGAGATCTTCGAGCTCCTCGGTGACTCTGATGTCGTGAAGCGTACCATCGAGCGCGATACCGCCCTCACCCGCGAGGACGCCCTCATCGAGATCTACCGTCGTCTGCGCCCCGGCGAGCCGCCGACCGTCGACGCCTCCCGCAGCCTGCTCGAGGGCCTGCTGTTCAACCCGCAGCGTTACGACCTCGCCCGCGTCGGCCGCTACAAGGTCAACAAGAAGCTCAACCTCACCACGGAGGAGGACGTCACCGTCCTTACCGATGAGGACATCATCGCCACCCTGCGTTACCTGCTGTCCCTGGCCGCGGGCGAGCACGGTTTCAAGGTCGATGACATCGACCATTTCGGCAACCGCCGCATCCGCACCGTGGGCGAGCTGGTGGCCAACCAGTTCCGCATCGGCATGAGCCGCATGGAGCGCGTCGTGCGTGAGCGCATGAGCTCCCAGGACGTCGACGAGATCACGCCCCAGAGCCTCATCAACATCCGCCCGATCGTGGCCTCCATCAAGGAGTTCTTCGGCTCCTCCCAGCTCTCTCAGTTCATGGACCAGGCCAACCCGCTGACGGGCCTCACCCACAAGCGTCGTCTGTCCGCACTCGGCCCCGGTGGCCTGGCCGGTCACAAGTCCGGCTCCAGCCGCCGTACCAACGTGCCGACCGCCGTCCGCGACGTCCACAACTCGCACTACTCCCGTATGTGCCCCATCGAGACGCCCGAAGGCCCCAACATCGGCCTGATCGGTTCGCTGGCCCTGTACGCCCGTGTGAACGAGTACGGCTTCATCGAGGCTCCCTACCGCAAGATCGAAAACGGTGTCGCCACCGACCAGATCGACTGGATGACCGCCGATGAGGAGGAGCTGCACATCATCGCTCCTGCCAACACGCCGATCGATCCTGAGACCAACGAGCTCGTGACCGTCGACGCCGATGGCAACCTCGTGCGTCCCCACACCGTCGTCGCCCGTACGCGCGACTTCGACGGCTCCTTCGGCGCTCCCGCCGACGTGCCGGTCGAAGACGTCGACTACATGGACGTCTCCCCGCGTCAGATGCTCTCCGTCGCGGCCACGCTCATCCCGTTCCTCGAGCACGACGACGCCAAGCGTACCCTCATGGGTGCCAACATGCAGCGTCAGGCCGTGCCGCTGGTCCACCCGGTCGCCCCGTACGTCGGCACCGGCATGGAGAAGCGCGCCGCCATCGACTCCGGCGAGGTCACCCTGGCCAAGCGCGCCGGTGAGGTCATCTTCGCCGACGCCGCCAAGATCACGGTGAAGACCGCCGAGGGCCTGGACACCTACAAGATGCCCAAGTACCAGCGCTCCAACCAGTCCACCTGCATCAACCACCGCCCGCTCGTGCGCGTGGGCGATCAGGTCACCGTGGGCCAGCCCCTGGCCGACGGCCCCTCCACCGATCACGGCGAGCTTGCCCTCGGCCAGAACCTGACCGTGGCCTACATGCCGTGGGAGGGCTTCAACTACGAGGACGGTATCATCGTCTCCGAGCGCCTCGTCTCCGAGGACCTGCTCACCACCATCAACATCTCCCGCTACGAGCTCGATGCCCGTGACACCAAGCTCGGCCCCGAGGAGATCACCCGCGAGATCCCGAACCTGTCCGAGGACATGCTCGCCAATCTCGACGAGGACGGCATCATCCGCATCGGTGCCGAGGTCAAGGCCGGCGACATCCTGGTTGGTAAGGTCTCTCCCAAGGGTGAGTCCGCGCTGACCGCCGAGGAGCGCCTGCTCCGTGCCATCTTCGGCACCAAGGCCCACGATGTCCGCGACACCTCCCTCAAGATGCCCCACGGCGCTGAGGGCCGCGTCATCGACGTCGTGCGCTTCAGCCGTGAGAATGGCGACGACCTCGCCCCCGGCGTGAACGAGCAGGTTCGCGTGTACGTCGCGCAGCGTCGTAAGATCCAGCAGGGCGACAAGATCGCCGGTCGCCACGGCAACAAGGGTGTTATCTGCGAGGTCCTGCCCGTGGAGGACATGCCCTACATGTCCGACGGCACCCCGGTCGACGTCATCCTAAACCCGCTGGGCGTCCCCTCCCGTATGAACGTCGGCCAGCTCCTCGAGTGCCACCTCGGCTGGGCTGCCGCCTGCGGTTGGGACACCGAGTCCGCGGATTCCGACAAGTACGTCCCCGGTCCATTCTTCACCGCGACGCCCGTCTTCGACGGCGCCCACGAGGACGAGATCGCCGAGGTCATCCGTCGCGCCAACCGCAACATGGTGAACCTGGCCACGGAGCGCTTCGGCGAGCACATGAACCCCGCGTTCGTGACCCAGCTCGACGAGCGCGGCAAGACCGTGCTCTACGACGGCCGCTCCGGTGAGCAGTTCCGTGAGCCCATCACCATCGGCACCTCCTACATCCTGAAGCTCGGCCACATGGTCGACGACAAGATCCACGCTCGCTCGACCGGCCCCTACAGCCTCGTCACCCAGCAGCCGCTGGGCGGTAAGGCCCAGTTCGGCGGCCAGCGCTTCGGCGAGATGGAGGTCTGGGCGCTGTACGCGTACGGCGCCGCCAACGTCCTCCAGGAGATCCTCACCGTCAAGTCCGACGACACCGTCGGCCGTGTGAAGACCTACGAGGCCATCACCAAGGGTGAGAACGTCCCCATGGCCGGCATCCCCGAGTCCTTCAAGGTTCTCGTCAAGGAGATCCGCTCGCTCGCGCTCGACATCGAGCCCATCCGCGACGCCGAGCCCGCGCCTGCGCCGGCTCCCGCCGCCGAGGACTCCGAGCTCGACCTGCCCTCCATCGATGAGGCCGACACCTCCGCCGACGCGGCCGACGCCATCCTCGATGAGCTCGCCGCCACCACGACCGATAAGGAGTAG
PROTEIN sequence
Length: 1163
VPKANATQTVTATERTRVNFGKIPETMELPNLISVQKESFERFMDEGLRDAFKESSPIQSQNHQLEVTFGHHQFGDPSHTVDECREKDMTYQAPLLTEVRLTNLETGEIKEQLVFMGDFPMMTDQGTFIINGTERIVVSQLVRSPGVYYGSEMDGGKQVYKAQVIPARGAWLEFEVDKRDQLVVSIDRKRKQSATMFLRALGIAVTNDEIFELLGDSDVVKRTIERDTALTREDALIEIYRRLRPGEPPTVDASRSLLEGLLFNPQRYDLARVGRYKVNKKLNLTTEEDVTVLTDEDIIATLRYLLSLAAGEHGFKVDDIDHFGNRRIRTVGELVANQFRIGMSRMERVVRERMSSQDVDEITPQSLINIRPIVASIKEFFGSSQLSQFMDQANPLTGLTHKRRLSALGPGGLAGHKSGSSRRTNVPTAVRDVHNSHYSRMCPIETPEGPNIGLIGSLALYARVNEYGFIEAPYRKIENGVATDQIDWMTADEEELHIIAPANTPIDPETNELVTVDADGNLVRPHTVVARTRDFDGSFGAPADVPVEDVDYMDVSPRQMLSVAATLIPFLEHDDAKRTLMGANMQRQAVPLVHPVAPYVGTGMEKRAAIDSGEVTLAKRAGEVIFADAAKITVKTAEGLDTYKMPKYQRSNQSTCINHRPLVRVGDQVTVGQPLADGPSTDHGELALGQNLTVAYMPWEGFNYEDGIIVSERLVSEDLLTTINISRYELDARDTKLGPEEITREIPNLSEDMLANLDEDGIIRIGAEVKAGDILVGKVSPKGESALTAEERLLRAIFGTKAHDVRDTSLKMPHGAEGRVIDVVRFSRENGDDLAPGVNEQVRVYVAQRRKIQQGDKIAGRHGNKGVICEVLPVEDMPYMSDGTPVDVILNPLGVPSRMNVGQLLECHLGWAAACGWDTESADSDKYVPGPFFTATPVFDGAHEDEIAEVIRRANRNMVNLATERFGEHMNPAFVTQLDERGKTVLYDGRSGEQFREPITIGTSYILKLGHMVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALYAYGAANVLQEILTVKSDDTVGRVKTYEAITKGENVPMAGIPESFKVLVKEIRSLALDIEPIRDAEPAPAPAPAAEDSELDLPSIDEADTSADAADAILDELAATTTDKE*