ggKbase home page

L3_105_000M1_scaffold_950_22

Organism: dasL3_105_000M1_concoct_62_fa

near complete RP 48 / 55 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(23766..27362)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 1164.0
  • Bit_score: 1798
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 1169.0
  • Bit_score: 1649
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FTM8_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 1164.0
  • Bit_score: 1798
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Eubacterium sp. CAG:841 → Eubacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3597
ATGGATAATAAAAATGTGTTTGATTCGATCAAAATCGGTTTGGCGTCTCCGGAGCAGATTCTGGCCTGGTCACACGGCGAGGTAACCAAGCCCGAAACGATTAACTATCGTACGCTGAAAGCAGAGCGTGACGGATTGTACTGCGAACGTATTTTTGGGCCAACCAAGGACTGGGAGTGCCAGTGCGGTAAGTATAAGCGGATTCGCTCCAAGGGAATTATTTGTGATCGCTGCGGCGTGGAAGTGACAACAAAAAAAGTGCGTCGTGAACGCATGGGACATATCGAACTCGCTTGTCCCGTTTCCCATATTTGGTATTTTCGTGCTATCCCGTCCCGGATGGGCTTGCTGTTGGATATTTCTCCTCGGCTGTTGGAAAAAGTGCTGTATTTTGCATCCTATATCGTCATTGATCCGGGTGCAACGCCGTTGGAAAAATATCAGTTGCTCACAGAAAAAGAGTATCGTGACAACTATGAAAAATACGAAACCGAGTTCCGTGTTGGTATGGGTGCAGAAGCGATTCAAGAGCTTTTGGCAGAGATCGATATTGAAAAGCTCTCTGCTGAATTGCGCGAAGAATTGGCGAGTGCAACCGGTCAAAAGAAAGTCCGTATCATCAAACGTCTGGAAGTCGTTGAGGCTTTCCGTAAATCCGGTAACCGTCCGGAATGGATGATTTTGACCCGTATTCCGGTTCTTCCGCCTGAAATTCGTCCGATGGTTCAGTTGGATGGCGGCCGTTTTGCAACGTCTGACCTAAACGATTTGTACCGTCGCGTGATTAGCAGAAACAATCGGTTGAAACGTATGATGGAGCTCAATGCGCCTGAAATCATCATTCGGAACGAAAAACGTATGTTGCAAGAGGCAGTGGACGCTTTGATTGACAATGGTCGTCGCGGCAAATCCGTGACCGGTCCCAACAATCGTCCGCTCAAATCACTTTCTGAATTGCTGCGTGGTAAGCAAGGACGTTTCCGTCAGAATTTGCTTGGTAAACGTGTGGATTATTCCGGCCGTTCCGTTATCGTGGTAGGTCCGTCGCTGAAGCTGTATCAGTGCGGTTTGCCCAAAGAAATGGCACTGGAACTTTTTAAGCCCTTTGTCATGAAGCGTTTGGTTGAAACACAAAAAGCTTCTAACATCAAAGATGCAAAGAAGAAAGTCGAAAAAGTAAACAACGATGTGTGGGATGCACTGGAAAATGTTATCAAAGAACATCCCGTGCTGCTCAACCGTGCGCCGACTTTGCACAAATTGTCTATTCAAGCGTTTGAGCCGGTGCTGGTAGAGGGCAGAGCCATTAAATTGCATCCCCTCGTATGTTCTGCATTTAACGCGGACTTTGACGGAGACCAAATGCCGGTACACGTCCCGTTGTCCAGCGAGGCGCAGGCGGAAGCACGTTTCTTGATGCTTTCAGCAAACAACCTGTTAAAACCGGTGGACGGCCGTGCCGTTGCCGTTCCCTCACAGGATATGGTGCTTGGTTCTTATTACTTGACCATTGACCGTGCAGGGGAATTGGGCGAAGGCAAGGCATTCCGTGATTTTAATGAGGCCATGATGGCATACGAAAATCACGAACTTGGCTTGCATGCAGCCATTAAATGCCGCGTATTTAAGGAAAAAGACGGCGTTATGCAATCAAAAGTGATCAATACAACACTTGGTCGTTTGATTTTCAATCAGCCGATTCCGCAAGATTTGGGGTTTGTCGATCGTTCCGATCCGGAGAAGTTTTTCGATTTGGAAATCGATTTTGTCACAACCAAAAAGGAACTGGGTGAAATCGTTGACCGCTGCATCAAGACGCATACGGCAACCGTAACGGCACAGGTGCTGGATGATATCAAGGACATGGGATACAAATATTCCACCAAAGGATCACTTTCTATTTCTTATGCCGATATCACAGTGCCAAAAGAAAAGAAAGAGCTGGTCGCTGCTGCTGAACAAAAAGTGGATGAAATCAACAATATGTTCCAAATGGGTATGTTGAGCGAAGATGAACGGTATCGCCATGTCATCAGCATTTGGAATCAGACCACCGCGGATGTTACGGCTGCACTGCAAAACTCTATGGATCGTTACAATCCGATCAAAATGATGAGCGATTCCGGTGCGCGTGGTTCTATGGCTCAGATGCGTCAGTTGGCCGGTATGCGTGGTTTGATGTTTTCCGCGACCGGACGTACCATGGAATTGCCCATCAAGTCCAACTTCAAAGAAGGTATGGACATTTTGGAATACTTTACCGGTGCGCGTGGTTCCAGAAAATCATTGTCTGATACGGCTTTGAAAACAGCCGACTCCGGCTACTTGACTCGTCGTCTCGTTGACGTTGCGCAAGATGTCATTATTCGCAGTGAAGACTGCGGTGATACGCACGGTGAATGGGTCAGCGACATTATGGATGGCAACGAGTTGATTGAACCTTTGAAAGATCGTTTGCCCGGACGTTATGTCATCGGAGATGTGGTTGACAAAGACGGCAATGTCATTGCCAAAGACGGTGATATGCTCACCTTGAAACAAGTCGATCAGATTCTTGCTGCCGGTATTGATAAAGTTCACATTCGTAGTGTGCTTTCCTGCAAATTGAAACACGGTATCTGCGCACATTGCTATGGCTCCGATCTTGCTTCCGGAAAAACAGTTAGCATTGGTGAATCTGTTGGTATCATCGCTGCACAATCCATTGGTGAGCCCGGTACACAGCTGACAATGCGTACCTTCCATACGGGTGGTATTGCCGGTGCCAATATTACGCAAGGTTTGCCGCGTGTTGAGGAGTTGTTTGAAGCTCGTCGACCCAAGGTTACGGCTGTAATTGCTGAAATTACCGGTATTTGCAAAATCACGGATGTGAAGAATCAGAAGAACATTACAATTACCGCCCAAGATGGGCAGGAGGTCTCTTATTCTATTCCATACGGAATGCACATTCTGGTGGAAGACGGTGACGAAGCATTCAAAGGTATGGCGCTTACCGAAGGTTATATGGCGCCTGCCGATATTCTGCGTATCAGCGGATTGGATGCTGTATATCAGTATATTTTGCGCGAAGTACAGAAAGTGTACCGTTTCCAGAGCATCGATATCAATGATAAGCATATTGAAGTTATCACGCGCCAGATGACACGCAAATGTCGTGTGGAGGATCCGGGTGACACAGATATGCTCACCGGGACTACGATGGACATTGCGGAATTTGACAATGAGAATGATCTCATTCGCAAGCGGATTGATGCCGGTGAGATCACATTGCGTACCGCAACGTATTCCCCGATGCTTTTGGGTATTACAAAAGCTTCTTTGATGACGGAATCGTTCCTATCGGCTGCTTCTTTCCAGGAAACGACGAAAGTTTTGACGGAGGCTGCAATCAAAGGAAAAGTCGATCACTTGCACGGCCTGAAAGAAAATGTTATCATTGGTAAGTTAATCCCGGCCGGTACAGGTATGGAATGTTATCGCAACGTTGAGGTGCTCCCGGTCGAACAAAACAGTGCGGCATCGGTTGCCGGTGACGACGATCATCCGGGAACGGATGAGGCTCCTGCGGCATCTTCGTTTGCGGAAAATGCATAA
PROTEIN sequence
Length: 1199
MDNKNVFDSIKIGLASPEQILAWSHGEVTKPETINYRTLKAERDGLYCERIFGPTKDWECQCGKYKRIRSKGIICDRCGVEVTTKKVRRERMGHIELACPVSHIWYFRAIPSRMGLLLDISPRLLEKVLYFASYIVIDPGATPLEKYQLLTEKEYRDNYEKYETEFRVGMGAEAIQELLAEIDIEKLSAELREELASATGQKKVRIIKRLEVVEAFRKSGNRPEWMILTRIPVLPPEIRPMVQLDGGRFATSDLNDLYRRVISRNNRLKRMMELNAPEIIIRNEKRMLQEAVDALIDNGRRGKSVTGPNNRPLKSLSELLRGKQGRFRQNLLGKRVDYSGRSVIVVGPSLKLYQCGLPKEMALELFKPFVMKRLVETQKASNIKDAKKKVEKVNNDVWDALENVIKEHPVLLNRAPTLHKLSIQAFEPVLVEGRAIKLHPLVCSAFNADFDGDQMPVHVPLSSEAQAEARFLMLSANNLLKPVDGRAVAVPSQDMVLGSYYLTIDRAGELGEGKAFRDFNEAMMAYENHELGLHAAIKCRVFKEKDGVMQSKVINTTLGRLIFNQPIPQDLGFVDRSDPEKFFDLEIDFVTTKKELGEIVDRCIKTHTATVTAQVLDDIKDMGYKYSTKGSLSISYADITVPKEKKELVAAAEQKVDEINNMFQMGMLSEDERYRHVISIWNQTTADVTAALQNSMDRYNPIKMMSDSGARGSMAQMRQLAGMRGLMFSATGRTMELPIKSNFKEGMDILEYFTGARGSRKSLSDTALKTADSGYLTRRLVDVAQDVIIRSEDCGDTHGEWVSDIMDGNELIEPLKDRLPGRYVIGDVVDKDGNVIAKDGDMLTLKQVDQILAAGIDKVHIRSVLSCKLKHGICAHCYGSDLASGKTVSIGESVGIIAAQSIGEPGTQLTMRTFHTGGIAGANITQGLPRVEELFEARRPKVTAVIAEITGICKITDVKNQKNITITAQDGQEVSYSIPYGMHILVEDGDEAFKGMALTEGYMAPADILRISGLDAVYQYILREVQKVYRFQSIDINDKHIEVITRQMTRKCRVEDPGDTDMLTGTTMDIAEFDNENDLIRKRIDAGEITLRTATYSPMLLGITKASLMTESFLSAASFQETTKVLTEAAIKGKVDHLHGLKENVIIGKLIPAGTGMECYRNVEVLPVEQNSAASVAGDDDHPGTDEAPAASSFAENA*