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L3_105_000M1_scaffold_10436_5

Organism: dasL3_105_000M1_concoct_68_fa

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 MC: 2 ASCG 14 / 38
Location: 3618..4463

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor Ts n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKP1_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 54.9
  • Coverage: 275.0
  • Bit_score: 296
  • Evalue 1.80e-77
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 275.0
  • Bit_score: 296
  • Evalue 2.60e-77
tsf; elongation factor Ts similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 281.0
  • Bit_score: 290
  • Evalue 4.90e-76

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Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 846
ATGGCTGATATTTCCGCTAAGCAAGTTGTTGCTTTGAGAGAGAGAACTGGCGTCGGAATGATGAAGTGTAAAGAGGCGCTTGTTAAAACTAACGGCGATATAGAGAAAGCGGTGCTTTTACTGCGTGAGCAGGGGCTTGCCGCCGCCGCGAAAAAAGCGAGCAGAATTGCCGCCGAAGGCGTTATCGCTATATACAACAAAAATAACATAGCCGTTCTTGTGGAAGTGAATGCTGAGACTGATTTTGTCGCTAAAAACGAAAAATTTACCACTTTCGCTAACAGGATTGCCGAAATTGTGGCTATTAATAATCCTTCAGATATCGAAGCGTTGAACGAAATGGAGTATGAGACCGGTAAAACCGTTGAGGATATGAGGAAAGAAATGGTTCTTGTAATAGGAGAGAATATTTCTGTTCGTCGTTTTGAAAGACTTGAGGGCGCTGTCGCGACTTATAACCACGGTAACGGAAAAATTGGAGTAATGGCGCTTTTTAATACGGAGCTTTCTGTTGCTTCCACCGAAAAGTTCCAGCTTTTCGGTAAAGATGTTTGTATGCAGGTGGCGGCTCTGAATCCGCAGTATCTCAGCAAAGAAGCTGTTCCCGCCGATGTTATAGAAACAGAGAAGACTGTTCTTATGGCTCAGATTAAAAATGATCCTAAGACCGCCAATAAACCGGAAGCTGTTCTTGAAAAAATGATTTCCGGAAAGCTTAATAAATTCTATTCTGAGAATTGCCTTTTGGAACAGGCTTACTTCAAAGATGAGTCTATGACCGTTGCGAAATACATCGCTTCTGCCGAAAAAGAGTTCGGCGTTGATATTTCGCTTGAAAAAGTCGTT
PROTEIN sequence
Length: 282
MADISAKQVVALRERTGVGMMKCKEALVKTNGDIEKAVLLLREQGLAAAAKKASRIAAEGVIAIYNKNNIAVLVEVNAETDFVAKNEKFTTFANRIAEIVAINNPSDIEALNEMEYETGKTVEDMRKEMVLVIGENISVRRFERLEGAVATYNHGNGKIGVMALFNTELSVASTEKFQLFGKDVCMQVAALNPQYLSKEAVPADVIETEKTVLMAQIKNDPKTANKPEAVLEKMISGKLNKFYSENCLLEQAYFKDESMTVAKYIASAEKEFGVDISLEKVV