ggKbase home page

L3_105_000M1_scaffold_1820_10

Organism: dasL3_105_000M1_metabat_metabat_15_fa_fa

near complete RP 45 / 55 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(12161..13498)

Top 3 Functional Annotations

Value Algorithm Source
rimO; ribosomal protein S12 methylthiotransferase RimO (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 438.0
  • Bit_score: 587
  • Evalue 2.30e-165
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.2
  • Coverage: 438.0
  • Bit_score: 587
  • Evalue 1.20e-164
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4N9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 63.2
  • Coverage: 438.0
  • Bit_score: 587
  • Evalue 8.30e-165

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus sp. CAG:57 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1338
ATGGAAAAAAAGTCCGTAAAGGTCGGAATGGTGTCATTGGGATGTCCGAAAAATCAGGTAGACGCCGAAATTTTGCTGGCAATGATTCAGGACGCCGGATATGAATTGACAAATGAAGCGGGACTTGCCGATGTGGTAATTGTCAACACCTGCGGTTTTATAGAAAGTGCAAAACAGGAATCGATTGAAAACATATTGGAGTTTTGCCAGTTGAAGCAAGAGGGACAGATCAAGTGTGTGGTTGTTACCGGCTGTTTGGCGGAGCGGTATCGGGATGAGGTTGCAAAGGAGATTCCGGAAGCAGACGTCATACTGGGGCTTGGCTCTAACAAGGAAATAGTATCTGCAATCAAAAGGGCTTTGTCGGGGGAACGTTTTACTTGCTATGGCGAAAAGAACAAATTGCCGATGGAGGGCAGGAGAGTGCTGACCACTCTCCCGTATTATGCTTATCTGAAAATAGCAGAGGGTTGTGACAACTGTTGCAGCTATTGCGCCATTCCGATGATCCGCGGCAGATTTCGGAGCCGGAAAATGGAAGATATCATTGACGAGGCAAAAGATTTGGCGGCACGCGGCGTCAAAGAATTGGTTGTAGTTGCACAGGATACGACTCGTTACGGTGAAGATCTGTATGAAAAGCAGCTGCTTCCCAAATTGTTGGAAGAGCTTTGTAAGATAGACGGATTTGTTTGGATACGTACATTGTACTGCTACCCGGAGCGCATTACAGATGAATTGCTGGATGTTATTGCCCGTGAGGATAAGCTTGCAAAATATTTGGACATTCCGCTGCAGCATTGCAGCAAGGATGTATTAAAAGCAATGAACCGAACAGGCAATCGGGAATCTTTGACAGCGTTGATGCAAAAGATCAGGCAGCGGATTCCGGGGATCACACTGCGCACTACGTTGATTGCAGGCTTCCCGGGAGAAACGGAAGAAAATTTCGAAGAGCTAATGGAATTTGTGAAAGAAATACGATTTGAACGGTTGGGGTGCTTTGCTTACTCTGCGGAGGAAGGAACTCGTGCAGCTGCAATGAAGGATCAGATTCCGGAAGAAATAAAGCAGCAGCGCGCCGATCACATTATGGAACAACAGATGTTTATTAATGAGCAAAACAATCAGGCGGAAATCGGGAAGACAAAACGAGCTGTGGTAGAAGGATATGATAAATACGGCTCTGTCTATTTTGGACGTACTGAGGGCGATGCGCCGGATATTGACGGAAAAATCTTTTTCAGTTCGGCAAAACCGCTGAAGATGGGTGAATTTATTGACGTATTGGTAGAAGACGTGCTTGATTATGATTTAATTGGCAGAGTCGTAGATTGA
PROTEIN sequence
Length: 446
MEKKSVKVGMVSLGCPKNQVDAEILLAMIQDAGYELTNEAGLADVVIVNTCGFIESAKQESIENILEFCQLKQEGQIKCVVVTGCLAERYRDEVAKEIPEADVILGLGSNKEIVSAIKRALSGERFTCYGEKNKLPMEGRRVLTTLPYYAYLKIAEGCDNCCSYCAIPMIRGRFRSRKMEDIIDEAKDLAARGVKELVVVAQDTTRYGEDLYEKQLLPKLLEELCKIDGFVWIRTLYCYPERITDELLDVIAREDKLAKYLDIPLQHCSKDVLKAMNRTGNRESLTALMQKIRQRIPGITLRTTLIAGFPGETEENFEELMEFVKEIRFERLGCFAYSAEEGTRAAAMKDQIPEEIKQQRADHIMEQQMFINEQNNQAEIGKTKRAVVEGYDKYGSVYFGRTEGDAPDIDGKIFFSSAKPLKMGEFIDVLVEDVLDYDLIGRVVD*