ggKbase home page

L3_106_000M1_scaffold_10248_1

Organism: dasL3_106_000M1_metabat_metabat_11_fa_fa

near complete RP 38 / 55 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(609..1850)

Top 3 Functional Annotations

Value Algorithm Source
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 413.0
  • Bit_score: 620
  • Evalue 1.50e-174
serine hydroxymethyltransferase (EC:2.1.2.1) similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 402.0
  • Bit_score: 592
  • Evalue 6.80e-167
Serine hydroxymethyltransferase n=1 Tax=Clostridium sp. CAG:138 RepID=R6AYN2_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 413.0
  • Bit_score: 620
  • Evalue 1.10e-174

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:138 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1242
ATGTTTGATTTTCCAAAGGTAAAAGCGACGGATCCCCAGGTATTTGAAGCCATGCAGCAGGAGCTGAACCGGCAGGAGGGAAATATTGAGCTGATCGCCTCTGAAAACTTTGTTTCGGAAGCCGTGATGCAGGCGATGGGCTCTCATCTGACCAATAAATATGCAGAAGGCTATCCGGGCAAGCGGTATTATGGCGGCTGCCAATATGTGGATATCGTTGAAGATTTGGCACGTGAGCGTGCGAAAAAGCTGTTTGGCGCGGAGCATGCCAATGTGCAGCCTCATTCCGGCGCCCAGGCCAATACGGCGGTATATTTCGCCATGTTGAATCCCGGGGATACCATTATGGGCATGAGCCTTTCCCATGGCGGCCATCTGACCCATGGAAGCCCGGTCAATATCTCCGGAAAATATTTTCATTTTGTTTCTTATGGCGTGGATGAAAAAACAGAGCAGATCGATTATGATGCAGTGGAAAAGCTGGCAGAAGAATGCAAACCCAAGATGATCGTTGCAGGTGCCAGCGCCTATCCCCGCAAAATCGATTTTGAACGCCTTTCTCAGATCGCAAAGAAAGTAGGGGCATATCTCATGGTAGATATGGCGCATATTGCCGGCCTGATCGCCGCCGGACTGCACCAGAACCCCGTGCCCTATGCGGATTTTGTCACGACGACGACCCACAAGACCTTGCGCGGGCCCCGCGGCGGCATGATTCTCTGCAAGGAGGAATATGCAAAGCAGATTGACAAGGCAATTTTCCCCGGCACGCAGGGCGGCCCTCTGATGCATGTGATCGCGGCCAAGGCCGTTTGTTTCCAGGAGGCGCTGCAGCCGGAGTTTAAGGAATATCAGGCACAGATCATTAAAAATGCGGCGGCGCTGGCCAAAAGCCTGATGGAAAATGACGTCCGTCTGGTTTCCGGCGGAACAGATAATCACTTGATGTTGGCGGATGTTTACAGCAAGGGAATGACGGGAAAGGAAGCCGAAGCTCTTCTGGATGAGGCGCATATTACTGTCAATAAGAACACGATCCCGACAGAAACTCTGAGCCCATTTGTCACCAGCGGAATCCGCATCGGAACACCGGCGATTACGACCCGGGGATTCAAAGAGGAAGAGGCCGCAAAAGTGGGCAAGTGGATTGCGCAGATTGTGACGGAAGGCGAATCCGCTGTGGAAAAGGTGAAAACAGAAGTAGCCGAGCTTTGCGCTAAATTCCCGCTCTATAAGAAATAA
PROTEIN sequence
Length: 414
MFDFPKVKATDPQVFEAMQQELNRQEGNIELIASENFVSEAVMQAMGSHLTNKYAEGYPGKRYYGGCQYVDIVEDLARERAKKLFGAEHANVQPHSGAQANTAVYFAMLNPGDTIMGMSLSHGGHLTHGSPVNISGKYFHFVSYGVDEKTEQIDYDAVEKLAEECKPKMIVAGASAYPRKIDFERLSQIAKKVGAYLMVDMAHIAGLIAAGLHQNPVPYADFVTTTTHKTLRGPRGGMILCKEEYAKQIDKAIFPGTQGGPLMHVIAAKAVCFQEALQPEFKEYQAQIIKNAAALAKSLMENDVRLVSGGTDNHLMLADVYSKGMTGKEAEALLDEAHITVNKNTIPTETLSPFVTSGIRIGTPAITTRGFKEEEAAKVGKWIAQIVTEGESAVEKVKTEVAELCAKFPLYKK*