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L3_114_000M1_scaffold_183_7

Organism: dasL3_114_000M1_concoct_0_fa

near complete RP 48 / 55 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: 8268..8543

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein HU n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMZ2_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 90.0
  • Bit_score: 166
  • Evalue 7.10e-39
DNA-binding protein HU {ECO:0000313|EMBL:EFB75927.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 90.0
  • Bit_score: 166
  • Evalue 1.00e-38
Bacterial nucleoid DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 92.0
  • Bit_score: 114
  • Evalue 9.10e-24

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Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 276
ATGACGAGATCTCAGTTGATTACCAAGGTTGCCAACGACACCAACATGACCGCTGCTGAAGTTGAGAAGGTTATGGACGGCATCTTCGGCACCATCGGCGATGTCCTCAAGAGCGGCGACAAGGTCACCATCGCAGGCTTTGGCCGCTTCGAGATGCGTGAGCGCCAGACCAAGAACTTCACCAACCCCAAGACCAAGGTCACCAGCAAGCTGGAGCCGACGGCCATCCCCGGCTTCAAGGCCAGCGGCCGCCTGAAGGAAAAGGTCTCCGGCTGA
PROTEIN sequence
Length: 92
MTRSQLITKVANDTNMTAAEVEKVMDGIFGTIGDVLKSGDKVTIAGFGRFEMRERQTKNFTNPKTKVTSKLEPTAIPGFKASGRLKEKVSG*