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L3_114_000M1_scaffold_183_34

Organism: dasL3_114_000M1_concoct_0_fa

near complete RP 48 / 55 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: comp(35600..36316)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 238.0
  • Bit_score: 387
  • Evalue 9.40e-105
ribosomal small subunit pseudouridine synthase A (EC:5.4.99.- 5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 236.0
  • Bit_score: 329
  • Evalue 4.70e-88
Pseudouridine synthase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIW4_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 81.1
  • Coverage: 238.0
  • Bit_score: 387
  • Evalue 6.70e-105

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Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 717
ATGATGCGGCTGGATAAATACCTGGCCGAGCGCACCGGCATGACCCGCAGCGAGAGCCGCAAGGCCGTAACGAAGGGCCGCGTCAGCATCGACGGCGCAGTCTGCCGCAAGGCTGACACCCAGCTGGACGAGCACACCGCCGCCGTGGCGCTGGACGGTGTGCCGCTGGCGGGCGCGTACCGGAAATTTGTGTATATCATGCTCAACAAGCCCGAGGGCGTCGTCAGTGCCAGCCGCGACAAAAAGGACACGACGGTGGTCGATCTGGTCGCGGCGGACTTTCCGCGGCGGGAGCTGTTCCCCGCGGGGCGGCTGGACAAGACGAGCACCGGCTTTGTCCTGCTGACTGACGACGGCGCGCTGGCGCATGACATCCTCTCCCCTGCCCACCACGTCGAGAAGCAGTACGTAGTCACGCTGGACACGCCGCTGACCGACACGATGCGCCGGGGCTTTGCCGCGGGCGTCACGCTGACCGACGGCGAGACGATGGCTCCCGCGGGCGTCGAGCCGCTGACCGACGACGGCCTGACCGTGCAGGTCACGCTGCGGCAGGGCGTCTATCATCAGATCAAGCGGATGTTCGGCGTGTTTGATGCGGGTGTGAACGCCCTGCACCGTGAGAGCATCGGCGGCGTGGCGCTGGACCCCGCGTTAGCGCCCGGCCAGTGGCGTGAGCTGACAGCGGAGGAAGTGGAACGGCTGCGCACAAGGTAA
PROTEIN sequence
Length: 239
MMRLDKYLAERTGMTRSESRKAVTKGRVSIDGAVCRKADTQLDEHTAAVALDGVPLAGAYRKFVYIMLNKPEGVVSASRDKKDTTVVDLVAADFPRRELFPAGRLDKTSTGFVLLTDDGALAHDILSPAHHVEKQYVVTLDTPLTDTMRRGFAAGVTLTDGETMAPAGVEPLTDDGLTVQVTLRQGVYHQIKRMFGVFDAGVNALHRESIGGVALDPALAPGQWRELTAEEVERLRTR*