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L3_114_000M1_scaffold_17310_1

Organism: dasL3_114_000M1_concoct_0_fa

near complete RP 48 / 55 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: comp(2..355)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKM7_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 116.0
  • Bit_score: 197
  • Evalue 4.90e-48
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 116.0
  • Bit_score: 197
  • Evalue 6.90e-48
RNA polymerase, sigma 29 subunit, SigE similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 118.0
  • Bit_score: 151
  • Evalue 8.70e-35

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Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 354
ATGCTCAAGGAGCTGTACCTTTTGTGGCTGCGGCTGGCCGCGCCGCAGGACTTGCACTACATCAACGGGGCCGACACCCTGCCGCCGCCCCTGCCGCCGGAGCAGGAGCGCGCTGCCCTGGATGCGCTGACCCGGGGGCAGCCGCAGGCACGGGACCTGCTCATCACACATAATCTGCGGCTGGTCGTGTACATTGCCAAGAAGTTTGAAACGCCCACCGCTGGCATCGAGGACATGATTTCCATCGGCACTATCGGGCTTATCAAGGCGGTCAACACATTCGAGCCGACGAAAAACATCAAGCTGGCAACCTACGCCAGCCGATGTATTGAAAACGAGATTTTAATGTACCTG
PROTEIN sequence
Length: 118
MLKELYLLWLRLAAPQDLHYINGADTLPPPLPPEQERAALDALTRGQPQARDLLITHNLRLVVYIAKKFETPTAGIEDMISIGTIGLIKAVNTFEPTKNIKLATYASRCIENEILMYL