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L3_121_000G1_scaffold_308_7

Organism: dasL3_121_000G1_concoct_113_sub_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(7515..10871)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 1118.0
  • Bit_score: 2197
  • Evalue 0.0
transcription-repair coupling factor (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 1118.0
  • Bit_score: 2185
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NSU5_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 1118.0
  • Bit_score: 2197
  • Evalue 0.0

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Taxonomy

Ruminococcus sp. CAG:55 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3357
ATGCAGGCTTTTTTAGAACCATTAAAAGAACTGGCTGATTATCAGGAGATTGTCAGTTCGAGAAGAAAGAAAACGGGTTTCCTGCAAATCGCAGGATGTGTGAATTCACAGAAGATACATCTTGCGAAAGCACTGAGCGATGGCTTTGAGTACAGAGTCATCGTTTTTTCCAGTGAAGAAAAAGCAAAACAGGCTTATGAAGAATGGCGTGTACTGGAGGAAAATGTATGGTTTTATCCGGCAAGAGATCTTTTGTTTTATCATGCAGATATTAAGGGCGCATTTTTGACAGGGAAACGTATGGAAGTATTGCGTGCGATTGTAGAGAAGAAAGGACGGGAAGCAATTACTGTAGTTACAACAATGGACGCATTTCTGGATGGGCTTCCATCGAAAGAAGAACTGTGCGGGAACAGGATTAAGATTCATGCAGAAGAGGCGTTGGATTTTCAGAAATTACAGGAAAACCTTTCGATATTAGGATATGAAAGGGAAAACCAGGTTGAAAGTCCGGGACAATTTGCAGTCAGAGGTGGGATTCTGGATGTATTTCCACTGACAGAGGAGAATCCGGTTCGAATTGAATTATGGGGAGACGAAGTTGATTCTATTAGAAGTTTTGATGTGGAAAGTCAGAGGTCGACAGAGAATTTACAGGAAATAGAAATCTATCCGGCAACTGAGAACTGGAAGCAGATGGAAACGGAAAGCTTTTTGGCATATTTTCCGGTAAAGGAGACAATCTTGTTTTTGGATGAACCGGTACGTCTTCAAGAATCTGCAGAAATCGTGGAAAAAGAGTATTTTCACAGCTTGGAGAGCAGAGAAGAAGCCGGTATGGAGACAGATGAGATTCCGATTCAGGTGGAACAGACAGATCATACGATTGGAAAGATGAACAAGTATTATGGAATTGCATTTACCATGTTGGAATCAAAATGTGGAATGTTTAAAGTAAGGTCTGTCTACAGTCTGCAGGTTAAAACTGTCAATCCGTATAATAGCAGTTTTGAGCTCCTGACACGAGATCTGAAGAAACTGAAAAGAACAGGGTATCGTGTGATTCTTGTTTCGGGTTCAAGAACAAGAGCAAAACGTCTTGCAGAAGATCTGAGAGATTATGACCTGAGCAGTTTTTATAGTGAAGAGATGGAACGGCAGGTGAATCCGGGAGAGATTATGGTAACCTGTGGTTACATTGCAGAGGGATACGAATACCCGATGTTAAAGTTTACGGTCATCTCGGAATCTGATATTTTTGGTAAGAAAAAGAAAAAAAAGAAAAGAAAAACTTATGAAGGAAAAAAAATCCAGGAATTTGCCGAACTTAAACCGGGAGACTATGTGGTACATGAGAATCACGGACTTGGAATTTATCAGGGAATTGAGAAAGTCGAAGTAGATACTGTTACTCGAGATTATATGAAAATTTCCTATGCGGACGGAGGAATTCTCTATATACCGGCAACACAGATGGATCTGATCCAGAAATACGCAGGAGCAGATACAAAGCCACCAAAATTGAATAAGCTTGGGACACCTCAGTGGAAAAAAACAAAAGGACAGGTAAAAAAAGCGGTTCAGTTAATCGCAAAAGATCTTGTAAAACTCTACGCAACGCGCCAGCAGACAGAAGGTTATGTTTATGGACCGGATACGGTCTGGCAGAGAGAGTTTGAGGAGATGTTTCCATTTGAAGAGACAGAGGATCAGCTTCGTGCAATTGAAGATACAAAGAAAGATATGGAAAGTACGAAGATTATGGATCGTCTGATCTGCGGAGATGTAGGGTATGGTAAGACTGAAATTGCGATAAGAGCAGCTTTTAAGGCAGTGCAGGAAGGAAAACAGGTTGTTTATCTTGTACCTACAACGATTCTTGCGCAGCAACACTATAATACATTTATTCAAAGGTTTAAAGATTTTCCGGTGCGTGTTGACTTGATGAGCCGTTTTCGGACGCAGGCGCAGCAGAAAAAAACAGTAGAGGATTTGAAAAAAGGTCTGGTTGATATCGTGATCGGAACACACAGAGTGCTTTCAAAGGATGTTGGATATAAAGATTTAGGACTTCTGATCATAGATGAAGAACAACGTTTTGGTGTGACGCATAAGGAAAAAATTAAAAAATTAAGAGAAAATATAGATGTGTTGACGCTGACAGCAACGCCAATCCCAAGAACACTTCATATGAGTTTAATCGGAATTCGCGATATGAGTGTGCTTGAGGAAGCACCGATGGATCGTATGCCAATACAGACGTATGTAATGGAATACAATGATGAGATGGTTCGTGAGGCTATTGAGCGTGAACTTGCCAGAGGTGGACAGGTTTATTATGTTTATAACAGAGTAGAAAATATTGCAGATCTAGCATTTCGTGTGCAGAAACTGGTGCCGGATGCAAGGGTATCTTACGCACATGGACAGATGAATGAACATCAGTTGGAAGATATTATGTATGATTTTATCAATGGTGATATTGATGTGCTTGTATCGACAACAATTATTGAAACAGGACTGGACATTGCGAATGCTAATACGATGATTATACAAGATGCAGATAGATTTGGACTGTCACAGTTATATCAGTTGCGAGGAAGAGTTGGGAGATCCAATCGAATGGCATATGCATTTCTGTTGTATCAGAGGGATAAGATGCTTAAAGAAGTTGCAGAGAAGAGGCTGGCTGCAATTCGTGAATTTACAGATCTTGGATCGGGATTCAAGATCGCAATGCGTGATCTTGAGATCCGAGGTGCGGGAAATCTTCTAGGAGAGTCGCAAAGTGGTCATATGGCAGCAGTTGGGTATGACTTGTACTGCAAGATGCTTAATGAGGCTGTCAGTCAGTTGAAAGGTAAAAAAGAAGAAGCAGACTACGCTACAACGATTGATCTTGATATAGATGCATTTATTCCGGAATCTTACATTAAAAACGAGTATCAAAAATTGGATATTTATAAGAGGATTGCCACAATTGAAACAGAAGAAGAGATGGATGATATGACAGAAGAACTGATTGATCGTTTTGGAGATCTTCCGAAAAAAGTACAGCAGCTTCTTCATATTGCAGCACTTAAGAGTCTTGCGCATTCTGCATATATTACAGCGATAGAACAAAAGGGAAAAGACTACAAATTTATCTTATATGAAAAAGCAAATCTGGATCCGGCAAAAATTCCGGCACTTTTAAAGAAATATGGAAATAATATGACTTTCAAAGCAGAAGCAGTCCCGTATTTCCTTTATCAAAAGAAAGGGAGAAGCGGAAAAGAGAAAGGGGAAAATGTTCTGCAGATGCTAAGAGAAATTATAGAGAGTATTCGCGAACTTCGATTAGATCAGGGAAGTTGA
PROTEIN sequence
Length: 1119
MQAFLEPLKELADYQEIVSSRRKKTGFLQIAGCVNSQKIHLAKALSDGFEYRVIVFSSEEKAKQAYEEWRVLEENVWFYPARDLLFYHADIKGAFLTGKRMEVLRAIVEKKGREAITVVTTMDAFLDGLPSKEELCGNRIKIHAEEALDFQKLQENLSILGYERENQVESPGQFAVRGGILDVFPLTEENPVRIELWGDEVDSIRSFDVESQRSTENLQEIEIYPATENWKQMETESFLAYFPVKETILFLDEPVRLQESAEIVEKEYFHSLESREEAGMETDEIPIQVEQTDHTIGKMNKYYGIAFTMLESKCGMFKVRSVYSLQVKTVNPYNSSFELLTRDLKKLKRTGYRVILVSGSRTRAKRLAEDLRDYDLSSFYSEEMERQVNPGEIMVTCGYIAEGYEYPMLKFTVISESDIFGKKKKKKKRKTYEGKKIQEFAELKPGDYVVHENHGLGIYQGIEKVEVDTVTRDYMKISYADGGILYIPATQMDLIQKYAGADTKPPKLNKLGTPQWKKTKGQVKKAVQLIAKDLVKLYATRQQTEGYVYGPDTVWQREFEEMFPFEETEDQLRAIEDTKKDMESTKIMDRLICGDVGYGKTEIAIRAAFKAVQEGKQVVYLVPTTILAQQHYNTFIQRFKDFPVRVDLMSRFRTQAQQKKTVEDLKKGLVDIVIGTHRVLSKDVGYKDLGLLIIDEEQRFGVTHKEKIKKLRENIDVLTLTATPIPRTLHMSLIGIRDMSVLEEAPMDRMPIQTYVMEYNDEMVREAIERELARGGQVYYVYNRVENIADLAFRVQKLVPDARVSYAHGQMNEHQLEDIMYDFINGDIDVLVSTTIIETGLDIANANTMIIQDADRFGLSQLYQLRGRVGRSNRMAYAFLLYQRDKMLKEVAEKRLAAIREFTDLGSGFKIAMRDLEIRGAGNLLGESQSGHMAAVGYDLYCKMLNEAVSQLKGKKEEADYATTIDLDIDAFIPESYIKNEYQKLDIYKRIATIETEEEMDDMTEELIDRFGDLPKKVQQLLHIAALKSLAHSAYITAIEQKGKDYKFILYEKANLDPAKIPALLKKYGNNMTFKAEAVPYFLYQKKGRSGKEKGENVLQMLREIIESIRELRLDQGS*