ggKbase home page

L3_128_000G1_scaffold_10618_2

Organism: dasL3_128_000G1_concoct_2_fa

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 4 ASCG 13 / 38
Location: 427..4272

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 1283.0
  • Bit_score: 2380
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase, beta subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 1306.0
  • Bit_score: 1647
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDV3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 1283.0
  • Bit_score: 2380
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcaceae bacterium D16 → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3846
ATGGTCAAGGACGTGTACTACGGCAAGACCCTGCGTAAAAGCTTTGCCCGCTACGAGGAGATCCTGGATATGCCCAATCTGCTGGAGGTCCAGAAGAACTCCTATCAGTGGTTCCTGGACACCGGGCTGCGTGAGGTGTTCAAGGATGTAGACTCCATTACGGACTACGCCGGCAACCTGGAGCTGTCCTTCATCGACTACTCCATGGATGAGAAGCCCAAGTACGATGTGGAGGAGTGCAAGGCCCGGGATGCCACCTACGCCGCCCCCATCAAGGTGAAGGTGCGCCTGCGCAACAAGGAGACGGAAGAGATCAAGGAGCAGGAGATCTTCATGGGAGATTTCCCCATCATGACTCAGGCCGGTACCTTCGTCATCAACGGAGCTGAGCGTGTTATCGTTTCTCAGATTACCCGTTCCCCTGGTATGTACTTTACTGACACCCGGGATAAGGCGGATAACCACACCTACGGCACCACCGTTATCCCCTATCGCGGCGCCTGGTTGGAGTATGAGACTGACCTGTCCGACATTTTCTATGTCCGCATCGACAAGAACCGCAAGCTGCCGATCACCTGTCTGATCCGTGCCATTGGCCCCAAGACCGATGCAGAGATCCTGGAGATGTTTGGTGAGGACGAGCGCATCGTGGCCACCCTGGAGAAGGATCCCTGCAAGACCTACGAGGAGGCCCTGCTGGAGATCTACCGCAAGCTGCGTCCCGGCGAGCCCCCCACGGTGGACTCCGCCGAGAGCCTGCTCAACGCCACCTTCTACGATACCCGCCGCTATGATCTGTCTGCAGTGGGCCGTTATAAGTTCAACAAGAAAATGGCCCTGTGGACCCGCCTGGTGGGCCAAACTCTGGCCATGCCTGTGGCTGATCCCCGTACCGGCGAGATCATCGCCGAGGCCGGCGAGACACTGACCCGGGAGCGCGCCCGGGAACTGGATGACTGCGGCGTCAACGAGGTCGTCCTGGATGTGGACGGCAAGCAGGTGCGTGCATTCTCCAACAACATGGTGGACATGAAGAACTTCGTGGACTTCGACCCGGAGGAGTGCGGGGTTACGGAAATGGTGTTCTTCCCTGCCATGTGTCAGCTGCTGGATCAGTACAGTGGAGAGGATCTGAAGGATGCCATCCGGGATCATCTGGATGACCTGATCCCCAAGCACATCACCCGGGAGGACATCATGGCCTCCATCAACTACCTCAACTGCCTGGCTCATGGCGTAGGTACCCCTGATGATATCGACCATCTGGGCAACCGCCGCCTGCGCTGTGTGGGTGAGCTGATCCAGAATCAGTTCCGCATCGGCTTCTCCCGCATGGAGCGCGTCATCCGGGAGCGCATGACTACCCAGGACCTGGATGTAGTCACGCCCCAGTCCCTCATCAATATCCGGCCTGTCACCGCCGCCATCAAGGAATTCTTCGGCTCCAGCCCCCTGAGCCAGTTCATGGATCAGACCAACCCCTTGGCTGAGCTGACCCATAAGCGCCGTCTGTCTGCTCTGGGCCCCGGTGGTCTGTCTCGTGACCGCGCCTCCTTCGACGTCCGCGACGTCCATTACAGCCACTACGGCCGTCTGTGTCCCATTGAGACGCCGGAAGGTCCCAACATCGGCCTGATTTCCTACCTGGCCTCCTACGCCCGCATCAACCGTTACGGCTTCATCGAGACTCCCTACCGCAAGGTGGACAAGGCCACCGGCCAGGTCACCCAGGAGATCGAGTATATGACCGCCGACGTGGAGGATCAGTACACCATCTGCCAGGCAACTGAGCCGGTGGACGAGAATAACTGCTTTGTCAATGAGCGCATCACCTGCCGCCGCCGGAACGAGATCATCTCGGTGCCTGCCAATCAGGTGGACTATGTGGACGTGTCCCCCAAGATGATGGTGTCCATCGCCACCGCCATGATCCCCTTCCTCCAGAACGACGACGCCAACCGTGCCCTGATGGGCGCCAACATGCAGCGTCAGGCTGTGCCCCTGCTTCGTCCTGAGGCCCCCATTGTGGCCACCGGCCAGGAGCACAAGAACTGCATCGACTCTGAAGTTGCCATTCTGGCTGAGGGCCCCGGTACCGTCACCCGGGTGTCCGCCCGCTATATCACCGTGAAGTATGACAGCGGCGAGACCAAGGAGTACCGGCTGACCAAGTACCTGCGCTCTAACCACGGCACCTGCATCAACCAGCGCCCCATCGTGGACGTGGGCCAGCGGGTGGAGTTCCAGGATGTGCTGGCCGACGGCCCCTCCACCGACCGGGGCGAGATTGCCCTGGGCCGGAACATCCTCATGGGCTTTATGACCTGGGAGGGCTATAACTACGAGGACGCCGTCCTGCTCAACGAACGTATGGTTCGTGAGGACGTGTTCACCTCTATCCACATCGAGGAGTATGAGCTGGAGGCCCGCGACACCAAGCTGGGCCCCGAGACCATCACCCGTGACATCCCCAACGTAGGCGAGGACGCCCTGCGGGATCTGGATGAGCATGGCATCATTCGTGTGGGTGCTGAGGTCCACGCCGGCGACTATCTGGTCGGCAAGGTGGCGCCTAAGGGCGAGGCCGAGGCCACTGCGGAAGAGAAGCTGCTCCGCGCCATCTTCGGCGAGAAGGCCCGGGAGGTCCGTGACACCTCTCTGAAGGTGCCCCACGGCGAGAGCGGCACCATCGTGGACGTGAAGATCTTTACCCGTGAGAACGGCGATGAGCTGGGCCCCGGCGTCAACCAGTGCGTCCGGGTCTATATTGCCCAGAAGCGTAAGATCTCTGTGGGCGATAAGATGGCCGGTCGTCACGGCAACAAGGGTGTCGTGTCCCGCATCCTGCCCCAGGAGGATATGCCCTTCCTGCCAGACGGCACTCCCCTTGATATCGTGCTGAACCCCCTGGGCGTGCCTTCCCGTATGAACATCGGTCAGGTACTGGAGGTCCATCTGGGCTATGCCGCTAAGACCCTGGGCTGGAAGGTGGCTACCCCCATCTTCAACGGCGCCACCGAGGCCGATATCCAGGAGTGCATGAAGATGGCCGGCCTGGCCCGCGAGGTTGGTTATGACGAGCCCCTCATCGGCAAGCAGCTCTATCTGGCTGACGAGGCAGCAGAGAACGGTATGCGTGCCCTCTCCCAGGAGGAGATGGACGACTCCGTCCAGGTGCGGGAGTGGCAGAAGGCCGGACAGCTGCGCCTGGTAGACGGTAAGAACTGGCTGTATGACGGCCGTACTGGCCGTCGGTTCGACAACCCCGTCACAGTGGGCTATGTGTACTTCCTGAAGCTGCACCACCTGGTGGATGATAAGATCCACGCCCGCGCCACCGGCCCCTACTCCCTGGTCACCCAGCAGCCTCTTGGCGGTAAGGCCCAGTTCGGCGGCCAGCGCTTCGGTGAGATGGAGGTGTGGGCTCTGGAGGCCTACGGTGCTGCCTATACCTTGCAGGAGATCCTCACCGTCAAGTCCGACGATGTCACCGGCCGTGTTAAGACCTATGAGGCCATCGTTAAGGGCCATAATGTGCCTAAGCCTGGCGTGCCTGAGTCCTTTAAGGTGCTCATCAAGGAGCTCCAGTCCCTGTGTCTGGACATGAAGGTGCTGGACGCCCAGGGCAACGAGATCGAGCTGAAGGATGATGATGAGGACACCTATCAGCCTGGAGCCCGGGACGACTACTACAAGGACGACGAGGACTTCGGTTATGATAAGAACTCCGACTTCGCCTCCGCAGGCGGCTTCACCTTCAAGGGTGACAGCGATGATGACGACCTGACGCTGGAGCTGGAGGAAAGCTCTGAGGAGGGGCATCTCTCCGATGAGGACTATGAGTGA
PROTEIN sequence
Length: 1282
MVKDVYYGKTLRKSFARYEEILDMPNLLEVQKNSYQWFLDTGLREVFKDVDSITDYAGNLELSFIDYSMDEKPKYDVEECKARDATYAAPIKVKVRLRNKETEEIKEQEIFMGDFPIMTQAGTFVINGAERVIVSQITRSPGMYFTDTRDKADNHTYGTTVIPYRGAWLEYETDLSDIFYVRIDKNRKLPITCLIRAIGPKTDAEILEMFGEDERIVATLEKDPCKTYEEALLEIYRKLRPGEPPTVDSAESLLNATFYDTRRYDLSAVGRYKFNKKMALWTRLVGQTLAMPVADPRTGEIIAEAGETLTRERARELDDCGVNEVVLDVDGKQVRAFSNNMVDMKNFVDFDPEECGVTEMVFFPAMCQLLDQYSGEDLKDAIRDHLDDLIPKHITREDIMASINYLNCLAHGVGTPDDIDHLGNRRLRCVGELIQNQFRIGFSRMERVIRERMTTQDLDVVTPQSLINIRPVTAAIKEFFGSSPLSQFMDQTNPLAELTHKRRLSALGPGGLSRDRASFDVRDVHYSHYGRLCPIETPEGPNIGLISYLASYARINRYGFIETPYRKVDKATGQVTQEIEYMTADVEDQYTICQATEPVDENNCFVNERITCRRRNEIISVPANQVDYVDVSPKMMVSIATAMIPFLQNDDANRALMGANMQRQAVPLLRPEAPIVATGQEHKNCIDSEVAILAEGPGTVTRVSARYITVKYDSGETKEYRLTKYLRSNHGTCINQRPIVDVGQRVEFQDVLADGPSTDRGEIALGRNILMGFMTWEGYNYEDAVLLNERMVREDVFTSIHIEEYELEARDTKLGPETITRDIPNVGEDALRDLDEHGIIRVGAEVHAGDYLVGKVAPKGEAEATAEEKLLRAIFGEKAREVRDTSLKVPHGESGTIVDVKIFTRENGDELGPGVNQCVRVYIAQKRKISVGDKMAGRHGNKGVVSRILPQEDMPFLPDGTPLDIVLNPLGVPSRMNIGQVLEVHLGYAAKTLGWKVATPIFNGATEADIQECMKMAGLAREVGYDEPLIGKQLYLADEAAENGMRALSQEEMDDSVQVREWQKAGQLRLVDGKNWLYDGRTGRRFDNPVTVGYVYFLKLHHLVDDKIHARATGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTVKSDDVTGRVKTYEAIVKGHNVPKPGVPESFKVLIKELQSLCLDMKVLDAQGNEIELKDDDEDTYQPGARDDYYKDDEDFGYDKNSDFASAGGFTFKGDSDDDDLTLELEESSEEGHLSDEDYE*