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L3_128_000G1_scaffold_10618_3

Organism: dasL3_128_000G1_concoct_2_fa

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 4 ASCG 13 / 38
Location: 4294..5355

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 354.0
  • Bit_score: 702
  • Evalue 2.60e-199
rpoC; DNA-directed RNA polymerase beta' subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 90.8
  • Coverage: 349.0
  • Bit_score: 648
  • Evalue 8.90e-184
DNA-directed RNA polymerase subunit beta' n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDV4_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 354.0
  • Bit_score: 702
  • Evalue 1.80e-199

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Taxonomy

Ruminococcaceae bacterium D16 → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1062
ATGAGTTACGCTGAGTTTGACGCCATTCAGATCGGGATCGCCTCCCCCGAGCAGATCCGCGCCTGGTCCTACGGCGAGGTCAAGCGCCCGGAGACCATCAATTACCGCACTCTGAAGCCCGAAAAGGACGGCCTGTTCTGTGAAAAGATCTTTGGCCCCACCAAGGACTGGGAGTGTAACTGCGGCAAGTACAAGAAGATCCGCTATAAGGGCAAGGTCTGTGACCGCTGCGGCGTGGAGATCACCCGGGCGAAGGTGCGCCGTGAGCGCATGGGCCACATCGAGCTGGCCGCCCCAGTGTCCCATATCTGGTACTTTAAGGGTATCCCCTCCCGGATGGGCCTGCTGCTGGACATCAGCCCCCGGATCCTGGAGAAGGTTCTGTACTTTGCCAGCTATATCGTCATTGACCCCGGCTTCACCCCTCTCTCCAAGAACCAGATCCTGTCTGAGAAGGAATACCGGGATATGCGGGAGAAGTACGAGGACGACTTCGACGCCGGAATGGGCGCTGAGGCCGTGAAGAAGCTGCTCCAGCAGATCGATCTGGAGCAGCTGTCCGAGCAGCTGCGGAAGGAGCTGAAGGATGCCTCCGGCCAGAAAAAGGCCCGCATCGTCAAGCGACTGGAAGTTGTGGATGCCTTCCGGCTGTCCGGCAACAAGCCTGAGTGGATGATCATTGACGTACTGCCCGTCATCCCCCCGGAGATCCGGCCCATGGTTCCCCTGGATGGCGGTCGGTATGCATCCTCTGATCTGAACGACCTGTACCGCCGGGTCATCAACCGCAATAACCGCCTGAAGCGTCTGATCCAGCTCAACGCTCCGGACATCATCGTCCGCAACGAGAAGCGGATGCTCCAGGAGGCGGTGGACGCCCTCATCGACAACGGCCGCCGGGGCCGCGCTGTCACCGGCGCCAACAACCGGGCGCTGAAGTCCCTGTCCGATATGCTTAAGGGTAAGCAGGGCCGTTTCCGTCAGAACCTGCTGGGTAAGCGCGTAGACTACTCCGGCCGTTCTGTTATCGTGGTTGGTCCCTCCTTGAAGATCTACCAGTGC
PROTEIN sequence
Length: 354
MSYAEFDAIQIGIASPEQIRAWSYGEVKRPETINYRTLKPEKDGLFCEKIFGPTKDWECNCGKYKKIRYKGKVCDRCGVEITRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLLLDISPRILEKVLYFASYIVIDPGFTPLSKNQILSEKEYRDMREKYEDDFDAGMGAEAVKKLLQQIDLEQLSEQLRKELKDASGQKKARIVKRLEVVDAFRLSGNKPEWMIIDVLPVIPPEIRPMVPLDGGRYASSDLNDLYRRVINRNNRLKRLIQLNAPDIIVRNEKRMLQEAVDALIDNGRRGRAVTGANNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPSLKIYQC