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L3_128_361G1_scaffold_527_13

Organism: dasL3_128_361G1_concoct_72_fa

near complete RP 48 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(14367..17879)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 1170.0
  • Bit_score: 1821
  • Evalue 0.0
mfd; transcription-repair coupling factor (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 59.2
  • Coverage: 1172.0
  • Bit_score: 1352
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CI14_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 1170.0
  • Bit_score: 1821
  • Evalue 0.0

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Taxonomy

Clostridium sp. ATCC BAA-442 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3513
ATGCAGCTGCTGACCCAGGTCCTGCGGGAGCTGCCGGAGGTGCGCAAGCTCCTGGCGGCCATCGAGGAGGGGGGCTGTCCCGCGGCCTTCTCCGGCCTCTCCCCGGTACTGCGGGCCTATATTGCCGCCGCCGTCCGGCGGGAGACCGGCCGGAGCGTGGTACTGCTCTGCGCCGACGAGACCGAGGGGGAGCGCCTCAGCCGGGACCTGAGGGCCCTGACCGGGGAGGAGGTGCGCCTGATAGCGGCCCGGGAGTTTACCTTCCACCACGCCGCGGTGGTCTCCCGGCAATATGAGCACCGGCGCCTGGCCGCCTTCCACGCTCTGCTGGAGGGGAAGAGTCCCCTCACCGTGGTAACGGTGGAGGCCCTCCTCCAGCGCACCCTGCCCCCGGAGGCCCTGAGACGGGCCAGCCGCACCATCCGCCTGGGGGAGAGCTATGACCTCAACGAGCTGGCCGAGGCCCTCTCCGCTGCGGGCTATACCCGGGGACAGCAGGTGGAGGGCGTGGGCCAGTTTGCCCTGCGGGGCGGCATTCTGGACTTCTTCTCTCCGGCCCAGGAGCGGCCGGTCCGGGTGGAGTTCTTCGGCGACGAGGCCGACTCCATGGGTTATTTTGACGTCAACACCCAGCGCCGCACGGAAAACTGTGAGGAGGCCTGCTTCCTCCCGGCGGCCGAGGTGCTGCCCCAGCTCTCCCCCGGCGGGGCGGAGGGACTGAAGGAGCGCCTGACCGGGCTGCTCTCCCAGGTCCGCCGCCGGAAAGGGGACCAGGCCGCCCTCCTTCAGAATCTGGAGGAGGATCTGGAGCGGCTGACCCAGGAGACCTCCTTCCCGGCCCTGGACCGGTATCTGGCCCTGGTCTATCCGGAGATGGCCACCGCCGCCGACTACCTGCCCGAGGACGCGGTGGTGCTCTTCAGCGAGAGCCCCCGGGTGGTCGAGCGGGGGAAAAACTATCTCTGGCAGATGGGGGAGGACACAAACGCCCTGCTGGAAAACGGCACGCTGGCTGGGGAGTGCGCCCGCTTTACCCGCACCCTGGAGGAGCTCTATGCCCGCCTGTCCGACTGGCCGGTGGCCTATCTGGACTCTTTTGCCACGGGGCAGTACCCCATGAAGCCCCGCACCCTTCTGAACCTGCTGGCCAAGCAGCTCCCCTCCTACGGGACCAGCCTGGAGACGGCGGTCTCCGACCTCTCCCACTATCTGGATGAGGGATACCGGGCGGTGGTGCTGGTCTCCAGCCAGCAGCGGGCCGACAACCTCCAGGCCCTCCTGCGGGAGCAGGGGCTCCGGCCTGCGGTGGACTATGCCCTCCATGCTCTGCCCGAGTCGGGAAAGGCCACCATCGCCGTGGGCGGATTGTCGGCGGGCCTGGAATTCCCGGAGGCCCGCTTTGCCATCCTCACCGAGGGGAGCGCGGCCCCCGTCAAGAAGGCCCGGGCCAAGGCAGTCACCAATCGGGCCAAGCTCAGCTCCTATGCCGATCTCTCTCCCGGCGACCTGGTGGTCCACGAACACCACGGGGTGGGCCGCTATCAGGAGATGGTCAAGATGCAGGTGGACGGGGTGGAGAAGGACTACATCAAGATCGCCTATGCCGGGGCCGATGTACTCTATGTTCCCGCCACCCAGCTGGACCTGGTGAGCAAATACATTGGAGGCGGCGAGGACGCCCAGGAGAAGAAAAAACTCTCCAAGCTGGGAGGGACCGACTGGGAAAAGGCCAAGACCCGGGCGAAAAAGGCGGTCAAGGACCTGGCCAAGGGCCTCATCCAGCTCTATGCCGAGCGGCAGCGCCAGCCGGGCTATGCCTTTTCTCCCGACTCCGAGTGGATGCGGGAGTTTGAGGAGCAGTTTGAGTACGCCGAGACCGACGACCAGCTCCGCTGCATCGAGGAGATCAAGCGGGACATGGAGACAGCCCGGCCCATGGACCGTCTGCTCTGCGGCGACGTGGGCTACGGCAAGACCGAGGTGGCCTTCCGGGCCATCATGAAGTGTGTGCTGGACGGCAAGCAGGCGGCCATCCTGGTGCCCACCACCGTTCTGGCCCGGCAGCACTTCCTCTCCGCCAAGCAGCGCTTTGCCCGGTATCCGGTGGACATCGACGTGGTCTCCCGCTTCCGCACCAGCGCCCAGATGAAGGAGACATTGCGCCGGGTGGAGCAGGGGGGCGTGGACCTGCTCATCGGAACCCACCGGCTCTTTCAGAAGGATGTGAAGTTCAAGGACCTGGGGCTCCTGGTCATCGACGAGGAGCAGCGCTTTGGCGTGGCCCACAAGGAGCGGCTCAAGGAGATCTCCAAGCAGGTGGATGTGCTCACCCTGTCGGCCACTCCCATTCCCCGGACCCTCAATATGGCCCTCTCGGGCATCCGGGATATGTCCACCCTGGAGCAGCCCCCCATGGACCGGCAGCCGGTGCAGACCTATGTGCTGGAGCACGACTGGGGAGTCCTGGCCGATGCCATGCGCCGGGAGCTGGAGCGGGGCGGCCAGATTTACTACCTCCACAACCGGGTGGAGACCATCACCCGCACGGCCGCCCGTATCAAGGAGATGCTGGGAGGCGAGGTGTCCGTGGGGGTGGCCCACGGCAAGATGTCCCAGGAGGAGCTCAACGACGTCATGAAGCGCATGAGCGACGGCGAGGTGGATATCCTGGTGTGCACCACCATCATTGAGACCGGCATCGACATCGCCAATGCCAACACCCTCATCATCGAGGACGCCGACCACATGGGCCTGGCCCAGCTCCACCAGATCCGCGGCCGGGTGGGCCGCTCCAGCCGCCGGGCCTATGCCTATCTGACCTTCCGGAAGGGAAAGGTGCTCAGCGAGGTGGCCTCCAAACGGCTGGGCGCCATCCGGGAGTTTGCGGAGTTCGGCTCGGGCTTCAAGATCGCCATGCGGGATCTGGAGATCCGGGGCGCGGGCAACGTGCTGGGCCCCGAGCAGAGCGGCTTCATGCTCAGCGTAGGCTACGACCTCTACCTCAAGCTCCTGGAGGAGGCGGTGCTGGAGGAGCGGGGAGAGCCCGTGCCCCGCAACACCGAGTGCTCCGCCGACCTCACGGTGGCGGCCTCCATCCCCGACCGGTATGTGCCCAGTCCTGAGCAGCGGATGGACCTCTACCGGCGCATTGCCGCCATCCGCAGCGAGGAGGATGCCGACGATCTGACCGACGAGCTCATCGACCGCTATGGCGATCCCCCGCGGACGGTGAACAACCTCATCGCCGTGGCTCTCATGCGTGCCGACGCCGCCCGAAACGGCATTTTGGAGATCAATCAGAAGGGGACCAACCTCCATTTCTACCTCAGCGACTTCCAGCTGGAGCGGATCTCCACTCTCTGCGCCGAGCGGAAATACCAGGGGCGGCTGGTGGTGGTGCCCGGGGAGCGGCCCTGCATCGCCCTGCGCCTGAAAAAGGGAGAGGACGCCCTCAAGTGGAGCCGAAAGCTGGTGGAGGACTACTCCGCCACCGCCCCTGCCGTGGCGGAGTGA
PROTEIN sequence
Length: 1171
MQLLTQVLRELPEVRKLLAAIEEGGCPAAFSGLSPVLRAYIAAAVRRETGRSVVLLCADETEGERLSRDLRALTGEEVRLIAAREFTFHHAAVVSRQYEHRRLAAFHALLEGKSPLTVVTVEALLQRTLPPEALRRASRTIRLGESYDLNELAEALSAAGYTRGQQVEGVGQFALRGGILDFFSPAQERPVRVEFFGDEADSMGYFDVNTQRRTENCEEACFLPAAEVLPQLSPGGAEGLKERLTGLLSQVRRRKGDQAALLQNLEEDLERLTQETSFPALDRYLALVYPEMATAADYLPEDAVVLFSESPRVVERGKNYLWQMGEDTNALLENGTLAGECARFTRTLEELYARLSDWPVAYLDSFATGQYPMKPRTLLNLLAKQLPSYGTSLETAVSDLSHYLDEGYRAVVLVSSQQRADNLQALLREQGLRPAVDYALHALPESGKATIAVGGLSAGLEFPEARFAILTEGSAAPVKKARAKAVTNRAKLSSYADLSPGDLVVHEHHGVGRYQEMVKMQVDGVEKDYIKIAYAGADVLYVPATQLDLVSKYIGGGEDAQEKKKLSKLGGTDWEKAKTRAKKAVKDLAKGLIQLYAERQRQPGYAFSPDSEWMREFEEQFEYAETDDQLRCIEEIKRDMETARPMDRLLCGDVGYGKTEVAFRAIMKCVLDGKQAAILVPTTVLARQHFLSAKQRFARYPVDIDVVSRFRTSAQMKETLRRVEQGGVDLLIGTHRLFQKDVKFKDLGLLVIDEEQRFGVAHKERLKEISKQVDVLTLSATPIPRTLNMALSGIRDMSTLEQPPMDRQPVQTYVLEHDWGVLADAMRRELERGGQIYYLHNRVETITRTAARIKEMLGGEVSVGVAHGKMSQEELNDVMKRMSDGEVDILVCTTIIETGIDIANANTLIIEDADHMGLAQLHQIRGRVGRSSRRAYAYLTFRKGKVLSEVASKRLGAIREFAEFGSGFKIAMRDLEIRGAGNVLGPEQSGFMLSVGYDLYLKLLEEAVLEERGEPVPRNTECSADLTVAASIPDRYVPSPEQRMDLYRRIAAIRSEEDADDLTDELIDRYGDPPRTVNNLIAVALMRADAARNGILEINQKGTNLHFYLSDFQLERISTLCAERKYQGRLVVVPGERPCIALRLKKGEDALKWSRKLVEDYSATAPAVAE*