ggKbase home page

L3_129_030G1_scaffold_369_13

Organism: dasL3_129_030G1_concoct_11_sub_fa

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: 13950..17819

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 1289.0
  • Bit_score: 2569
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 1285.0
  • Bit_score: 2342
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium sp. CAG:58 RepID=R6RTU1_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 1289.0
  • Bit_score: 2569
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:58 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3870
ATGGAGAAAAGCAGAATACGTCCGGTGCCGGCCGGTAAAAGCGTAAGGATGAGCTACTCGAGACAGAAGGAAGTTCTTGAGATGCCGAACCTGATCGAAATCCAGAAAGATTCCTATCAGTGGTTCCTGGATGAGGGCCTGAAAGAGGTCTTCGAGGATATCTCTCCCATCGCGGACTTTGCTGGTCATCTGAGTCTGGAGTTTGTGGACTTCACACTTTGCAAAGATGATATCAAGTACACGATCGAAGAGTGCAAAGAGCGGGATGCCACTTACGCAGCACCTTTAAAAGTAAAGGTGAGACTCTGCAACAAAGATAAAGATGAAATCAATGAACACGAGATCTTCATGGGTGATCTTCCATTAATGACCGATACAGGTTCCTTCGTCATCAACGGAGCAGAGCGTGTTATCGTCAGCCAGCTGGTACGTTCCCCCGGAATCTATTATGGGATCGATCACGATAAGATCGGAAAGGAATTATATTCCTGTACCGTGATCCCCAACCGCGGCGCATGGCTGGAGTACGAAACAGACTCCAACGACGTGTTCTATGTCCGCGTAGACCGTACAAGAAAGGTCCCGGTGACAGTCCTGATCCGTGCCCTGGGTTACGGCACCAATGCAGAGATCACCGAGTTATTCGGAGAGGAGCCCAAGCTGCTGGCCAGCTTTGGAAAGGATACCTCCGATAACTATCAGGACGGCCTTCTTGAATTATATAAAAAGATCCGTCCCGGCGAGCCGCTTTCCGTGGACAGCGCCGAGAGCCTGTTGAACAGCATGTTCTTCGACCCCAGAAGATATGATCTGGCAAAGGTCGGCAGATATAAATTTAATAAGAAGCTTCACTTTAAGAATCGTATCACGGGTCAGATCCTGGCAGAGGATGTGGTGGATACCACAACCGGCGAAATCCTTGCCGAGGCTGGAAAGACCGTGACCATGGAGCAGGCAGAAGCCATTCAGAATGCGGCTGTTCCCTATGTATGGGTGCAGACCGAGGAGAGGAACGTGAAGGTCCTTTCCAATATGATGGTGGATCTGGCCGCCTATGTGGGTTTTGATCCGGAAGAGGCCGGCGTTACGGAGTTAGTATTCTACCCGGTACTGGCCGATATCCTGGAAAAAGCAGGTGATATGGGAGAGGATGAGTTAAAGGCAGAGATCCGCCGCCACATCCACGACCTGATTCCCAAGCACATCACAAAGGAAGACATCATTGCTTCCATTAACTATAATATGCATCTGGAGTTCGGTGTTGGTACGAAGGACGATATCGACCATCTTGGAAACCGTAGGATCCGTGCAGTGGGTGAGCTCTTACAGAACCAGTACCGCATCGGTCTTTCCAGAATGGAGCGTGTGGTAAGAGAGCGTATGACCACACAGGATATGGAGGGGATCACTCCCCAGTCTCTGATCAACATCAAGCCGGTGACGGCTGCGGTGAAGGAGTTCTTCGGAAGCTCCCAGCTGTCCCAGTTCATGGACCAGAACAACCCGCTGTCTGAGCTGACCCATAAGAGACGTCTTTCTGCATTAGGCCCCGGCGGTCTGTCCAGAGAGCGTGCCGGATTCGAGGTCCGTGACGTACACTACACCCACTACGGACGTATGTGTCCCATCGAGACTCCTGAGGGTCCCAACATCGGTCTGATCAACTCCCTGGCCTGCTACGCCAGAGTGAACCAGTACGGCTTTGTGGAGGCTCCGTACCGGGTGCTGGATAAATCCGATCCGGCCAACCCCATCGTGACCGACGATGTGGTATACCTGACTGCCGATGAAGAGGATAACTATGTAGTTGCCCAGGCCAACGAGCCCTTAGACGAGGAAGGCCACTTTGTCCACAACAATATTTCCGGACGTTTCCGTGAGGAGACATCCTCCTTCCAGAAGCGCTCCATCGACTTAATGGACGTATCCCCGAAGATGGTATTCTCCGTGGCTACATCCATGATCCCGTTCCTGGAGAACGACGACGCAAACCGTGCGTTAATGGGCTCCAACATGCAGCGTCAGGCTGTGCCGCTGCTTTCCACCGAGGCTCCGGTGGTAGGAACTGGTATCGAGGCCAAGGCGGCTGTTGACTCCGGCGTCTGCGTCGTTGCAAAGAATGCCGGCGTGGTAGAGCGCTCCGCCTCCAACGAGATCATCATCAAGAGAGATTCCGACGGTATGAAGGATGTGTACCGTCTGACAAAATTCGCAAGAAGCAACCAGTCCAACTGCTACAACCAGAAGCCCATCGTTTACAAGGGAGACCATGTAGAAAAGGGAGAGGTGATCGCAGACGGCCCGTCCACAAAGAACGGTGAGATCGCCCTTGGAAAGAACCCGCTGATCGGTTTCATGACCTGGGAAGGCTACAACTATGAGGACGCTGTACTGTTAAGTGAGAAACTGGTCCAGAACGACGTATATACCTCCGTCCATATCGAGGAGTACGAGGCAGAGGCCAGAGACACCAAGTTAGGACCGGAAGAGATCACCAGAGACGTTCCCGGCGTTGGTGACGATGCCTTAAAGGATCTGGACGAGCGCGGGATCATTCGCATCGGCGCAGAGGTCCGTGCCGGCGATATCCTGGTAGGTAAGGTAACTCCCAAGGGAGAGACTGAGCTGACCGCAGAAGAAAAGCTTCTCCGCGCCATCTTCGGCGAGAAGGCAAGAGAGGTCCGCGACACTTCCCTTAAGGTACCCCACGGCGCTTATGGCATCATCGTGGACGCCAAGGTATTCACAAGAGAGAACGGCGATGAGCTGGCTCCCGGCGTGAACCAGTCCGTAAGGATCTACATTGCCCAGAAGAGAAAGATCTCCGTGGGCGATAAGATGGCCGGCCGTCACGGAAACAAGGGTGTTGTTTCCCGTGTGCTCCCGGTTGAGGATATGCCGTTCTTACCCAACGGCCGTCCGCTGGATATCGTATTGAACCCCCTGGGCGTGCCGTCCCGTATGAACATCGGACAGGTGCTGGAGATCCACTTAAGCCTGGCTGCCAAGGCCCTGGGCTTCAATGTATCCACGCCGGTCTTCGACGGAGCCAACGAGGATGATATCCAGGATACCCTGGAACTGGCCAACGATTATGTAAATATGGAATGGGATGCATTCCATGAGAAATATGCAGATCTGATCAAGCCGGAGGTCATGGAATATCTGGGAACCCACTTAGAGCACCGCGGTCTCTGGAAGGGCGTGCCCATCAGCCGTACCGGTAAGGTGCAGCTGCGCGACGGCCGTACCGGAGAACCCTTTGACAGCCCCACCACCATCGGACACATGCATTACTTAAAGCTCCACCATCTGGTAGATGATAAGATCCATGCACGTTCCACTGGTCCATACGCACTGGTTACCCAGCAGCCTCTCGGCGGTAAGGCCCAGTTCGGCGGACAGCGTTTCGGTGAGATGGAGGTATGGGCCCTGGAGGCATACGGTGCATCCTATACGCTCCAGGAGATCCTGACCGTGAAGTCCGATGACGTTGTGGGCCGTGTGAAGACCTACGAGGCCATCATCAAGGGCGAGAACATTCCGGAGCCGGGTATCCCCGAGTCCTTCAAGGTACTCTTAAAGGAGCTCCAGTCCCTGGGTCTGGACGTGAGAGTCCTGAAAGACAACGGCGAGGAAGTGGAGATGTCCGAGAACATCGATTACGCAGACACCGACCTGGATCTGCGCTCCATCATCGAAGGCGACAGACGTTACGACGAGAAAGAGGAATCCTTCGGCAGCTACGGCTTCCAGAAGCAGGAGTTCAGGGACGGAGAGCTGGTGGATTCTGAGGATGACGACTATATCGACGGGCCGGAGGAAGAGGACGGCTACATCGATGACGACTATTCTGAAAAAGATAATTAA
PROTEIN sequence
Length: 1290
MEKSRIRPVPAGKSVRMSYSRQKEVLEMPNLIEIQKDSYQWFLDEGLKEVFEDISPIADFAGHLSLEFVDFTLCKDDIKYTIEECKERDATYAAPLKVKVRLCNKDKDEINEHEIFMGDLPLMTDTGSFVINGAERVIVSQLVRSPGIYYGIDHDKIGKELYSCTVIPNRGAWLEYETDSNDVFYVRVDRTRKVPVTVLIRALGYGTNAEITELFGEEPKLLASFGKDTSDNYQDGLLELYKKIRPGEPLSVDSAESLLNSMFFDPRRYDLAKVGRYKFNKKLHFKNRITGQILAEDVVDTTTGEILAEAGKTVTMEQAEAIQNAAVPYVWVQTEERNVKVLSNMMVDLAAYVGFDPEEAGVTELVFYPVLADILEKAGDMGEDELKAEIRRHIHDLIPKHITKEDIIASINYNMHLEFGVGTKDDIDHLGNRRIRAVGELLQNQYRIGLSRMERVVRERMTTQDMEGITPQSLINIKPVTAAVKEFFGSSQLSQFMDQNNPLSELTHKRRLSALGPGGLSRERAGFEVRDVHYTHYGRMCPIETPEGPNIGLINSLACYARVNQYGFVEAPYRVLDKSDPANPIVTDDVVYLTADEEDNYVVAQANEPLDEEGHFVHNNISGRFREETSSFQKRSIDLMDVSPKMVFSVATSMIPFLENDDANRALMGSNMQRQAVPLLSTEAPVVGTGIEAKAAVDSGVCVVAKNAGVVERSASNEIIIKRDSDGMKDVYRLTKFARSNQSNCYNQKPIVYKGDHVEKGEVIADGPSTKNGEIALGKNPLIGFMTWEGYNYEDAVLLSEKLVQNDVYTSVHIEEYEAEARDTKLGPEEITRDVPGVGDDALKDLDERGIIRIGAEVRAGDILVGKVTPKGETELTAEEKLLRAIFGEKAREVRDTSLKVPHGAYGIIVDAKVFTRENGDELAPGVNQSVRIYIAQKRKISVGDKMAGRHGNKGVVSRVLPVEDMPFLPNGRPLDIVLNPLGVPSRMNIGQVLEIHLSLAAKALGFNVSTPVFDGANEDDIQDTLELANDYVNMEWDAFHEKYADLIKPEVMEYLGTHLEHRGLWKGVPISRTGKVQLRDGRTGEPFDSPTTIGHMHYLKLHHLVDDKIHARSTGPYALVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYTLQEILTVKSDDVVGRVKTYEAIIKGENIPEPGIPESFKVLLKELQSLGLDVRVLKDNGEEVEMSENIDYADTDLDLRSIIEGDRRYDEKEESFGSYGFQKQEFRDGELVDSEDDDYIDGPEEEDGYIDDDYSEKDN*