ggKbase home page

L3_131_368G1_scaffold_3860_3

Organism: dasL3_131_368G1_concoct_60_fa

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38 MC: 2
Location: comp(2440..3273)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 n=5 Tax=Firmicutes RepID=E4LVJ4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 261.0
  • Bit_score: 276
  • Evalue 2.50e-71
Sigma-70 region 2 {ECO:0000313|EMBL:EFR37030.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.8
  • Coverage: 261.0
  • Bit_score: 276
  • Evalue 3.60e-71
sigma-70 region 2 family protein similarity KEGG
DB: KEGG
  • Identity: 45.4
  • Coverage: 269.0
  • Bit_score: 231
  • Evalue 2.00e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. HGF2 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 834
ATGGACAAACAAACTCAACCGCTATCCCCCGCTTTGATCAAGGAGGTGCTGGCGCATAAGCCGCAGGCCGCGGCCGAACTGGTTCAACAGCTGCAGACGCCGGTCTTTAACCTGGCTCTGCGGATGCTTGGAAGTGTGGCCGACGCCGAAGACGCAACCCAGGAAATCCTGCTTCTGGTTTTGGAAAAGCTGCCGGGCTTCCGCGGGGAAAGTGCCTTGACTACCTGGGTCTACCGGCTTGCGGTCAACCGGCTGATCGATGAAAAGCGTTCGATGTTCGCAACGCATCCGCTGAGCTTCGAGGCCTACGCCCAGGATATTCAGGCATTTCAGAAAGAATCGCAGCGGGAAGATAAGCAGATTCTGGCCCGGGAACTGAAATTGTCGTGCACCAACGTCATGCTTCAATGCCTGAAGCCGCAGGACCGCTGCATCTTCATCCTGGGCACGATGTTTAAAGCCGACAGCCGGCAGGCCGCGGAAATCCTGAATCTAACGCCGGAAGCTTACCGCCAGCGGTTATCGCGCGCCCGTCGGAAAATGGCAGACTTCATGTCGCAGTATTGTTACCTGGCTTCCGGCGGCTGCCGCTGCACCTGCCGGATCGACTTTGCGATCGGCACGCGCCGGCTGGATCCGGACAACCTGGAATATTCCAAGCTGCCGACAGCCGAACCGCAGGTTTTACATCAGCATTTAGAAGCGATGGAAAAAATTGAGGAACACATGACGGTGTTCGACACCCTGTCCGCCTATGCGCTGCCGGAAGAAAAGCGGCAGACATTACAGGATGTGGTCGCTTCCGTCTGGATGGAGAAAGTATGTCAGAATTAA
PROTEIN sequence
Length: 278
MDKQTQPLSPALIKEVLAHKPQAAAELVQQLQTPVFNLALRMLGSVADAEDATQEILLLVLEKLPGFRGESALTTWVYRLAVNRLIDEKRSMFATHPLSFEAYAQDIQAFQKESQREDKQILARELKLSCTNVMLQCLKPQDRCIFILGTMFKADSRQAAEILNLTPEAYRQRLSRARRKMADFMSQYCYLASGGCRCTCRIDFAIGTRRLDPDNLEYSKLPTAEPQVLHQHLEAMEKIEEHMTVFDTLSAYALPEEKRQTLQDVVASVWMEKVCQN*