ggKbase home page

L3_131_368G1_scaffold_2881_5

Organism: dasL3_131_368G1_concoct_60_fa

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38 MC: 2
Location: comp(3262..3525)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAV8_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 87.0
  • Bit_score: 177
  • Evalue 3.90e-42
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEF66884.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 87.0
  • Bit_score: 177
  • Evalue 5.40e-42
Helix-turn-helix. similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 83.0
  • Bit_score: 63
  • Evalue 2.30e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Holdemania filiformis → Holdemania → Erysipelotrichales → Erysipelotrichia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 264
ATGGAATACGTAACATTGATATCGAAAAGAATCCGGGAATTATGCAAACAAAGAGGTAACATTTCATATTATAAATTATCTGAAATGTCCGGCGTCAGCACCTCCACCTTGGAGAACATCATCAAAGGTCATACCAAGAATCCAGGAATCGCGACAATTCATCAGTTAGCGTTAGGTTTTAATATGACGATCGCTGAATTCTGTGATTTCGATGAAATGAACATGTATGAATTTGTCGAGGAGGAAAACGAAGTCGCCGGCTGA
PROTEIN sequence
Length: 88
MEYVTLISKRIRELCKQRGNISYYKLSEMSGVSTSTLENIIKGHTKNPGIATIHQLALGFNMTIAEFCDFDEMNMYEFVEEENEVAG*