ggKbase home page

L3_132_000M1_scaffold_1095_11

Organism: dasL3_132_000M1_concoct_18_fa

near complete RP 48 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 11495..12919

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA m(5)U-1939 methyltransferase n=1 Tax=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) RepID=A1VF60_DESVV similarity UNIREF
DB: UNIREF100
  • Identity: 44.1
  • Coverage: 478.0
  • Bit_score: 358
  • Evalue 8.70e-96
RNA methyltransferase similarity KEGG
DB: KEGG
  • Identity: 44.1
  • Coverage: 478.0
  • Bit_score: 358
  • Evalue 2.50e-96
RNA methyltransferase, TrmA family {ECO:0000313|EMBL:ADP86018.1}; TaxID=573059 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain RCH1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.1
  • Coverage: 478.0
  • Bit_score: 357
  • Evalue 2.70e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Desulfovibrio vulgaris → Desulfovibrio → Desulfovibrionales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1425
ATGATCTGGAATGCGGGCGACAGCCTGGAACTGACGCTGCACGGCCTGGCCCACGACGGGCGCGCCGTGGCCCGGCCCGAAAACGGGCCGGTGGTTTTTGTACGAGGCGGCCTGCCGGGACAACGTATCCTGGCGCGGCTGACAGCCGTCAAAAAACGCATGGCCGAGGCCGAAATGCTGAACGTCGTCGCTCCGGCGGAGGACGAGCGTCCGGCGCCCTGCCCCCACGCGGCGGACTGCGGAGGCTGCCCCTGGCAGAGCCTGCCTTACCGCGCTCAACTGGGCTGGAAGCGGCGTCTGCTCACGGACGCCCTGGCCCGCATCGGCGGCGTCAAGGATGCGGAAACGCTGACGCGGCCAGTCCTGCCCTCCCCCGCCAACGCTTTTGGACCGGGTGAATGGCGTTACCGCAACAAGATGGAATTCGCCTTCGCACCGGGGCCGGACGGCTTGCCCCGTCTCGGTCTGCGTCGTCGAGCCTCGCACGAGGTGGTGGACGTGGACGCCTGTCTGTTGCAAACGCCCCGGACCATGCGCGTCCTGGCCGCATTGCGCGTCCTGGTCCGCGCCTCGGGCCTGCCCGCCTGGACTCCGGAGGAACAGGCTCCGGGCGGGCTGCGCTTCGTCGTTATCCGCGAACCGGGCGGAACCCCGGGCGCGTGCGTGGTGGAGCTCATCAGCGCGCCGTTCGCCGCCGCGTCCCTCGTGACCGAGCTGGGCCGCGCCCTGCTGGACGGCCCCTGGGGCGTCACCGGCTTCATCCACAGCACGCGCGCCACCTCCTCCGATGTGGCCTACGGCGAAAAAACCGAGCTCACCCTGGGCGACACGACCCTCACTGAAAGCCTGAATCTGGCCGGACATCCGGCCCCGGTACGCTTTGCCCTGGGACACAACGCCTTTTTCCAGGTCAACAGCCGGGCCACGGAACTTCTGTATAACACGGCCGTGGCCCTGAGCGCCGAAACCGGCGGCATTCCGAACGGAACGGGCGGAACTTACTGGGACCTGTACTGCGGAGCAGGCGGTCTGGCTCTGGCCTTTGCGCCTCGGTTTGATGCGGTGCTGGGCCTGGAAAGCGTGCCCTCCGCCGTGGCCCTGGCCCGTCGCAACGCGGCGGCTTTTCCGAACTGCCGCTTCGAAAGCGCGGACGCGGGTCGAGTGGGCGAATATTTCCGCCGCTTCGGCACGCCGGACCTGCTCGGCGCAGACCCGCCCCGGGCCGGACTGGAGCCGCGCGTGGTACGGGCCCTGCTGCGGGCGCGACCGCCCCGGCTGCTTATGGTGTCGTGCAATCCGGCCACCCTGGCCCGCGATCTGGCGGCCCTGGCCCCGGCTTACGCAATCAAGGCCATACAGCCCGTAGACTTGTTCCCTCAGACGCCGCATGTGGAAAGTGTGGCATCGTTGGTTTTGCGCCGCTAG
PROTEIN sequence
Length: 475
MIWNAGDSLELTLHGLAHDGRAVARPENGPVVFVRGGLPGQRILARLTAVKKRMAEAEMLNVVAPAEDERPAPCPHAADCGGCPWQSLPYRAQLGWKRRLLTDALARIGGVKDAETLTRPVLPSPANAFGPGEWRYRNKMEFAFAPGPDGLPRLGLRRRASHEVVDVDACLLQTPRTMRVLAALRVLVRASGLPAWTPEEQAPGGLRFVVIREPGGTPGACVVELISAPFAAASLVTELGRALLDGPWGVTGFIHSTRATSSDVAYGEKTELTLGDTTLTESLNLAGHPAPVRFALGHNAFFQVNSRATELLYNTAVALSAETGGIPNGTGGTYWDLYCGAGGLALAFAPRFDAVLGLESVPSAVALARRNAAAFPNCRFESADAGRVGEYFRRFGTPDLLGADPPRAGLEPRVVRALLRARPPRLLMVSCNPATLARDLAALAPAYAIKAIQPVDLFPQTPHVESVASLVLRR*