ggKbase home page

L3_133_000M1_scaffold_1959_6

Organism: dasL3_133_000M1_concoct_86_fa

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(3387..4664)

Top 3 Functional Annotations

Value Algorithm Source
Site-specific recombinase, phage integrase family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9Z3_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 435.0
  • Bit_score: 399
  • Evalue 3.10e-108
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EBA39661.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.4
  • Coverage: 435.0
  • Bit_score: 399
  • Evalue 4.30e-108
Site-specific recombinase XerC similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 432.0
  • Bit_score: 321
  • Evalue 3.00e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Collinsella aerofaciens → Collinsella → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1278
ATGAGCACCAGACCACGAGTCATCGGAAACGGCAGCGTATACCAGGTTAAAGAGGGCGTATTCCAATACCGCTTCAACCTCGGCAAGGATCCAAAGACCGGCAAGTATGCCTATTCACCCAAGAGGACACTACACTGCGAAGGCGTGAACAAGCGAACACGGAACGCGATGCTCCGCAAGGCTTTGGAGGAATACAAGGAAGAGTTGAACTCCGGGCTCGTCCGGGATAACGGAAATCGAACCGTCGCGGAATATGCCAAGGACTTTCACAGTTTAAGGATAGGTAGCCTTTCGCCGCTCGCCTACGCCCGTGAGGGCAACTACATTAGCCACATTCAGAAGATGTTCGCCCACGTCCGGCTTGCCGATCTCCACCCAGACGACATACGGCACATTTACGCAGACGCTCGCAAAAAGGGAATGTCGGAAGCCGAGCTGCACGGAACGCACGTCAAACTCCGACAGATTCTTCAGGATGCCGTGGACAACGAGCTCATCCTTCGCAACCCGTGCACACCAGTCAAGCTTCCCAAACCAACTTACAGGGAAAGAACTCCGCTTACGGCAGACGAGGCTTCACGATTTCTGTCTTGCCTCATGGATGAACCACTGTCGGCCAAGGCAACGGGCACCATGCTCTTGCTCCAATGTGGTCTCCGACGCGGCGAAATGCTCGGCTTGACTTGGGGCGACATCGATCTTGGGCAGCGCACGTTAAGCGTGTCGAAGCAGTTCACCAATGACAAGACTCTCCGACCGCCAAAATCGAAGATGAGCCGACGCACCATAGCAATCAACGACTCCCTGGCCTGCTATCTCAGCAAATGGAAGCTGGAACAGCGGGCGCAGCTCAACCGATACACTCTCGATCAGGACGACAAGACGCCTATCGTTAACGGCATAAAGGTCGTCACGATCGAGGATGACATATACGCCACAGTCGTCAACGTAGACGGCCACAACTTCGACCGATGGTTCCGCGACTTCTGCGTCGATAACGGCTTTGGGAGCTACAACAATATCACCAGAAGATTCCAGCGAAACGGCAAAGAGCACGTGAGGGGTACGGGATACAGTGGGCTCGTCCCCCACGCCCTGCGGCACACGCAAGCGACGCTCCTAATCGGAGAAGGCGCAGACGTGAAGACTGTCCAGGCAAGACTTGGACACGCATCTCCAAGTACGACGCTCTCCATCTACTCCCACGCCATCGAGGCAAACGATCGTAAGGCAGCAGATGCCTTCGGCGAGCTCATTTCCCAAGAGAGCAATTCATAA
PROTEIN sequence
Length: 426
MSTRPRVIGNGSVYQVKEGVFQYRFNLGKDPKTGKYAYSPKRTLHCEGVNKRTRNAMLRKALEEYKEELNSGLVRDNGNRTVAEYAKDFHSLRIGSLSPLAYAREGNYISHIQKMFAHVRLADLHPDDIRHIYADARKKGMSEAELHGTHVKLRQILQDAVDNELILRNPCTPVKLPKPTYRERTPLTADEASRFLSCLMDEPLSAKATGTMLLLQCGLRRGEMLGLTWGDIDLGQRTLSVSKQFTNDKTLRPPKSKMSRRTIAINDSLACYLSKWKLEQRAQLNRYTLDQDDKTPIVNGIKVVTIEDDIYATVVNVDGHNFDRWFRDFCVDNGFGSYNNITRRFQRNGKEHVRGTGYSGLVPHALRHTQATLLIGEGADVKTVQARLGHASPSTTLSIYSHAIEANDRKAADAFGELISQESNS*