ggKbase home page

sw_11_scaffold_6953_1

Organism: SW_11_Chlorophyta_54_6

partial RP 6 / 55 MC: 1 BSCG 3 / 51 MC: 1 ASCG 6 / 38 MC: 1
Location: 179..1795

Top 3 Functional Annotations

Value Algorithm Source
Nucleolar protein, component of C/D snoRNPs n=1 Tax=Chlamydomonas reinhardtii RepID=A8J5K4_CHLRE similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 507.0
  • Bit_score: 556
  • Evalue 3.20e-155
Uncharacterized protein {ECO:0000313|EMBL:CCO16072.1}; TaxID=41875 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Bathycoccus.;" source="B similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 485.0
  • Bit_score: 556
  • Evalue 4.50e-155
Pre-mRNA processing ribonucleoprotein, binding region similarity KEGG
DB: KEGG
  • Identity: 35.6
  • Coverage: 348.0
  • Bit_score: 216
  • Evalue 1.70e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bathycoccus prasinos → Bathycoccus → Mamiellales → Mamiellophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 1617
ATGGCGGCGACGTACGCGCTGCACGAGAGCGCGAGCGGGTACGCGCTCTTTGAGACGAAGGGAACAGACGAGATTTCAGGCGATAACAAAGCTATTGCCGAGCTCGAGCGCTTCAGCAAGGTTGCGAAGCTGGCGGCGTTCCTGCCCTTCAACGACGCCGACTCAGCATCGAAAGAGATCACCCAGATCGCTGACGGATCCGCATCAGATCTTCTCATTGACTTCCTGAAACAGAACCTGCCAAAGCAGAAGAAACGCCAGTCAGTACAGCTGATTGTTGCTGAGCCAAAGGTTGGGAGCTCCATCAACGAGCGTGCTGGCATCCAATGTGTGTGCAACGAGCCAGCCAGTGAGCTGCTCCGTGGCATTCGAACACACTTCGGAAAGTTCGTCAACGGACTAGAGGAGGCCGGGCTGAAGCAGGCACAGCTTGGACTTGCGCACGCGTACTCACGCGCAAAGGTGCAGCACAACATCGCAAAGAGCGACACCATGATCATCCAGTCCATCAGCTTGCTTGACACGCTCGACAAGGACATCAACACCTTCATCATGCGCGTGCGCGAGTGGTACGGCTGGCATTTCCCAGAGCTCACGAAGATTGTCCGTGACAACTACACATACTCGCGCATTGCGCTGACCCTCCGTGAGCGCTCGAATGTGTCTGATGACATCATCCAACAGCTTGTTGAGATCGTTGATGGTGACGAAACGAAAGCTCAAGAGGTGTACTATGCCGCTCGCTCCAGCATGGGCCAGGACATCTCCTCCGTTGACATGGCCAACATCGAGACATTCGCTCGCAAAGTAATAAGCCTTGCCGAGTACCGCCAGCGCCTCTCGTCTTACCTCATCGACAAGATGCACATCGTTGCGCCCAATCTGTCGGCCTTAATAGGGGAGGTAGTTGGTGCACGCCTCATCAGCCACGCCAGCAGCCTGGCCAACCTTGCCAAGTACCCCGCAAGCACAGTGCAGATCCTTGGCGCTGAGAAGGCGCTCTTTCGTGCTTTGAAAACGAAGGGCAACACACCAAAATACGGCCTCATTTTCCACTCCACCTACATTGGCAGAGCTGGGCCGCGAAACAAGGGCAGGATCAGCCGCTACCTCGCCAACAAGTGCAGTATCGCCGCAAGGATCGACTGCTTCGCTGACTTTACAACCAACGCGTTCGGCGCAAAGCTAAAGGAGCAGGTGGAAGAGCGACTCAAATTCTACGACGAGGGAAAGGCTCCGCGGAAGAATGTTGACGTCATGAATGAAGCCGCAGAGACAACGAAGCAGCAAATGAGGGAGCAGCAGGAGGAAGAGAAGAATGGAGGCGTTGAAGCCGACAGGAGAGAGGAATCGAAAGAGGAGCGCAAGGCGAGAAAGAAGCGTGAGAAGCGCAACAAGCGCAAGCAGGAAGCTAGCGAGGATGCTGAAGCGGAGCAGTCCCCTGCAAACGGCGATGCTGAAGGAGGTGAAAGCAAAGAGGCAAAGAAGCTTCGCAAGAAGGAGAAGAAGCGCAAGCGGGAAAAAGAGGAAGCAAACGGCGTTGTGGGCGAGGAGGAGCATAAGGAGAAGAAGCGGCGGAAGAAGGAGAAAGAGAAGCAGAAGCAAATAGCAGAATGA
PROTEIN sequence
Length: 539
MAATYALHESASGYALFETKGTDEISGDNKAIAELERFSKVAKLAAFLPFNDADSASKEITQIADGSASDLLIDFLKQNLPKQKKRQSVQLIVAEPKVGSSINERAGIQCVCNEPASELLRGIRTHFGKFVNGLEEAGLKQAQLGLAHAYSRAKVQHNIAKSDTMIIQSISLLDTLDKDINTFIMRVREWYGWHFPELTKIVRDNYTYSRIALTLRERSNVSDDIIQQLVEIVDGDETKAQEVYYAARSSMGQDISSVDMANIETFARKVISLAEYRQRLSSYLIDKMHIVAPNLSALIGEVVGARLISHASSLANLAKYPASTVQILGAEKALFRALKTKGNTPKYGLIFHSTYIGRAGPRNKGRISRYLANKCSIAARIDCFADFTTNAFGAKLKEQVEERLKFYDEGKAPRKNVDVMNEAAETTKQQMREQQEEEKNGGVEADRREESKEERKARKKREKRNKRKQEASEDAEAEQSPANGDAEGGESKEAKKLRKKEKKRKREKEEANGVVGEEEHKEKKRRKKEKEKQKQIAE*