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sw_4_scaffold_24906_1

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: comp(2..601)

Top 3 Functional Annotations

Value Algorithm Source
Coatomer protein complex n=1 Tax=Micromonas sp. (strain RCC299 / NOUM17) RepID=C1E4N8_MICSR similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 200.0
  • Bit_score: 196
  • Evalue 3.20e-47
Coatomer subunit alpha {ECO:0000256|PIRNR:PIRNR003354}; TaxID=582737 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorodendrophyceae; Chlorodendrales; Chlorodendraceae; Tetraselmis.;" source="Tetr similarity UNIPROT
DB: UniProtKB
  • Identity: 49.5
  • Coverage: 194.0
  • Bit_score: 199
  • Evalue 5.20e-48
coatomer protein complex similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 200.0
  • Bit_score: 196
  • Evalue 9.90e-48

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Taxonomy

Tetraselmis sp. GSL018 → Tetraselmis → Chlorodendrales → Chlorodendrophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 600
ATGATAGCAGCAGCAGCTTGTAGCCATGCAGCGCTTCCTGGCTTTCCGTGCGTGCCCCAACCGGAGCTGCCTCTCTTCAAGCATGAATCAGAGTCCGATTCGCGCAAGCAATTCTCGTCTCCAGCAACTCCGTATACGCTACAGCAATGCGAAGAGCAGTTGCAGAGAGCTTACAAGCTGACAACCGATGGCAAGTTCAGCGAGGCGTACAAGGCGTTCCTTATTATCATGCACACTTTGCCACTCGTTCAAGTCGGTACGAAGAAAGAGGTGGACGATGGAAAGGAACTGATCTCAATTGCTAGGGAGTACATCATCGGCTTGCGGGTTGAAATGAAGCGGAAAGAGACGAAAGACGATCAGAAGCGGAACGCTGAGCTCGCCGCGTACTTTACGCATTGCAGCCTGCAGCCGATCCATGCGTCGCTCGCCCTCAGGTCCGCCATGTTCATCTTCTACAAGATGGGTAACCATAGCAGCGCCTGCGGTTTCAGCAGGCGACTGCTTGATCTCAATCCGCCGACGAAATTTGCGCAACAGGCACGACAAGTGCTGTCGTCAGCTGAGCAAAGTCCAGCGGACGCCATTGAGATTGACTAC
PROTEIN sequence
Length: 200
MIAAAACSHAALPGFPCVPQPELPLFKHESESDSRKQFSSPATPYTLQQCEEQLQRAYKLTTDGKFSEAYKAFLIIMHTLPLVQVGTKKEVDDGKELISIAREYIIGLRVEMKRKETKDDQKRNAELAAYFTHCSLQPIHASLALRSAMFIFYKMGNHSSACGFSRRLLDLNPPTKFAQQARQVLSSAEQSPADAIEIDY