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sw_4_scaffold_5562_7

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: 3286..4212

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: DEAD-box ATP-dependent RNA helicase 50-like isoform X2 n=1 Tax=Setaria italica RepID=UPI000350A378 similarity UNIREF
DB: UNIREF100
  • Identity: 38.8
  • Coverage: 309.0
  • Bit_score: 190
  • Evalue 2.70e-45
DEAD-box ATP-dependent RNA helicase 50-like similarity KEGG
DB: KEGG
  • Identity: 38.8
  • Coverage: 309.0
  • Bit_score: 190
  • Evalue 8.40e-46
Uncharacterized protein {ECO:0000313|EnsemblPlants:Si034592m}; TaxID=4555 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; similarity UNIPROT
DB: UniProtKB
  • Identity: 38.8
  • Coverage: 309.0
  • Bit_score: 190
  • Evalue 3.70e-45

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Taxonomy

Setaria italica → Setaria → Poales → commelinids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 927
ATGAAAACGCAAATCCAGTTCCTCAAAGAGGAGAACCTGGACGTTGTCGTTGCCACACCTGGCCGTCTGCTCTCCTTCGCAGGCATGGGCTTAGTCGAGCTTTCACAAGTCGCCTCTGTTGTCTTCGATGAAGCGGACTTGCTTGCTTCTCGTGAGCGTGGCTTTCATGACCAGCTCGTTGAGCTTGCTGGTGAGCTCTCGTCCCGCACACAGGTTGTTTTGGCCACCGCAACTATGCCAAAAGAGCAGCTGCCTTCTGTTGAGCGCATGTTTCACAATCTGCGGATCATCTCCGGACCAAATGTCCATAAATCTGGTCAACGTATCAAACACAGCGTCATCGACTGTTCACTTGAATCTTCAGAAGGTGATAGTGCTCCAGAGGGCACTCTCAGAGCATCTGCAGCTGCTTCGTCTCCAAACGAGGACAATGACTCCGCATGCGAGCTCAAACTCGCGCGGCTAGAGCGTGAATTACGGCGCGAGGGTGGCCAAACTCGAACAGTAATTTTCTGCAACTCGCTCGCAACATGCAGGCGGGTTGAGAACCGGCTGAGAAAAGGTGATAGAAAGGAAAAGGTTCGGCGGGTGCGAGCTGTGCACAGCGGGTTGCGAAGAGAGCAGCGAGAAGCGAATATCGCGCTCCTGTGCAGCGCGGGCGATGACGATACAGACTTGCGGTCGCTCATCATTGTCACCACGGACCGCGCATCGCGTGGGCTGGACGTGTACGTGGATCAAGTTGTGCTCTTTGATTTGCCTGATTCGCCATCAGAATTCATTAGGCGAGCGGGACGAGCTGCTCGCGGAACTCGGAAGCCTGCACGAGTAACGTGCCTTGCTGTTGGGGAGGAGCTAGCAATCGCAAGGCAGGTGATGGAGGCGTCGAACGCGCAAGGCTCGCCGCTCATGCAGACGCCTACGTAG
PROTEIN sequence
Length: 309
MKTQIQFLKEENLDVVVATPGRLLSFAGMGLVELSQVASVVFDEADLLASRERGFHDQLVELAGELSSRTQVVLATATMPKEQLPSVERMFHNLRIISGPNVHKSGQRIKHSVIDCSLESSEGDSAPEGTLRASAAASSPNEDNDSACELKLARLERELRREGGQTRTVIFCNSLATCRRVENRLRKGDRKEKVRRVRAVHSGLRREQREANIALLCSAGDDDTDLRSLIIVTTDRASRGLDVYVDQVVLFDLPDSPSEFIRRAGRAARGTRKPARVTCLAVGEELAIARQVMEASNAQGSPLMQTPT*