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sw_7_scaffold_1859_7

Organism: SW_7_Viridiplantae_56_9

partial RP 32 / 55 MC: 8 BSCG 16 / 51 MC: 4 ASCG 13 / 38 MC: 3
Location: 10999..12693

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=296587 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; M similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 582.0
  • Bit_score: 550
  • Evalue 3.40e-153
DNA-directed RNA polymerase n=1 Tax=Micromonas sp. (strain RCC299 / NOUM17) RepID=C1FDM4_MICSR similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 582.0
  • Bit_score: 550
  • Evalue 2.40e-153
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 35.8
  • Coverage: 595.0
  • Bit_score: 341
  • Evalue 6.30e-91

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Taxonomy

Micromonas sp. RCC299 → Micromonas → Mamiellales → Mamiellophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 1695
ATGGCTCGTATCATGCGGCCGGTGATAAATCTCAATCGCAAGGAAGTGGAGTACATCGGTACTTTAGAACAACCTTTCATGGACATTGCCTGTCCTGATCCGTCTAGAAAAGACGTTGCCGAGTTGCAGGCGACGCATGAGGAGCTCGGTAAGCGCAAATACACTGTACAAGCCGTCATTCATCCGCATGAAACCTTCCTGGGCCCTTTTTGTGCACACACAGGTCCCAACAGCATTTTGAGTGCAGTCGCTACCCTCACGCCATGGTCTGAGTTCAACCAGAGCCCGCGGAACATGTATCAGTGCCAGATGGCGAAGCAAACGATGGGAGTTCCTGTGCATAGTTTCCGTCATCGTCACGATAACAAGATGTACATGCTGGAGACGCCGCAGAAGCCGCTTGCGAGAAGTGAGCAGGAGGATAAACTCCATGTGAACGAATATCCTCAGGGCTTCAATGGGATTGTGGCTGTCATTTCGTACACTGGCTACGACATGGAAGACGCAATGATTGTGAACAAAGGAAGCATGGAGCGAGGGCTCGGCCGTGGGACGCTATACACCAGCGAGACAATATCAGTCGCGCAATCGCAGAGGAAGAATGCAGAGCCAGAGTCACTCGCACGCCCTGAGTTACGCGAAGGACAAGAGCGCAGACCAAAGGAGTTTTCGAACATTGATGCAGATGGCTTGCCAGCGCCCGGTCAGTCAATCGGTGTTGGAAACGTATATGCAACTAGCATTGGCGCAATTTCTGGTAAGGTGAAATCATACAACCTGAAAGACTCGGACGATGCGTACGTCGATCAAGTCACGCTGCTTGGCGATGACCAAAGATATGCAGGGCAAAGCGGAGCGAATATCAAGAAGCGGTTCCCGCGCAGGCCCATCATCGGTGATAAATTCAGCAGCAGGCATGGCCAGAAGGGCACTCTAAGTCTTTTGTATCCTGAAGAAGATATGCCATACATCGAAGGCACTGGAGTTCGTCCGGACATCCTCATAAACCCCAATGCCTTTCCGTCGCGCATGACAATCGGCATGCTCATTGAGAGCTTTGCGTCAAAAGCTGGCGCCCTTCGAGGCGAGAGTGTGGACGCAACAGCCTTTAAGAAATGTACCCGCGGAAAGGAAACATCCGATCCAGTTATGGACTTCGTGGAGCTCCTTCAGGAAGAGGGGTATCAGAAGTACGGCGGCGAAACTATGGTCTGCGGCGTAACAGGGGAGCTGCTTTACGTTGATGTCTTTATCGGGCTGGTCTACTATCAGAGACTGCGTCACATGGTGTCAGACAAGTTTCAAGTTCGCACTCTGGGTCCGATAAGCAATTTGACGCACCAACCAGTTAAGGGCCGCAAGGCTGGTGGCGGAATTCGTTTCGGTGAGATGGAGCGAGACGCGCTAATTGCCCACGGCGCATCGTATCTGCTGCATGACCGCCTTCACCTGTGCTCCGACCGCCATCTCGCTGATGTGTGCCGCAATTTCGGCACTTTTTTGTCGACTACGAGAGTGCCTGCGACGTCTTCCGATCTGAGAGGAGATCCTACCGGGCGTGATAGCGATCGAATTGAATGCATGCTTTGCAAGAGCAAAGAAAGTGTCGAGAAAGTTGCTTTGCCGTATGTGTTCCGCTATTTGGTGGTTGAATTAGCGGCGATGAATGTGAAAATGACGATGAGCGTGAGATGA
PROTEIN sequence
Length: 565
MARIMRPVINLNRKEVEYIGTLEQPFMDIACPDPSRKDVAELQATHEELGKRKYTVQAVIHPHETFLGPFCAHTGPNSILSAVATLTPWSEFNQSPRNMYQCQMAKQTMGVPVHSFRHRHDNKMYMLETPQKPLARSEQEDKLHVNEYPQGFNGIVAVISYTGYDMEDAMIVNKGSMERGLGRGTLYTSETISVAQSQRKNAEPESLARPELREGQERRPKEFSNIDADGLPAPGQSIGVGNVYATSIGAISGKVKSYNLKDSDDAYVDQVTLLGDDQRYAGQSGANIKKRFPRRPIIGDKFSSRHGQKGTLSLLYPEEDMPYIEGTGVRPDILINPNAFPSRMTIGMLIESFASKAGALRGESVDATAFKKCTRGKETSDPVMDFVELLQEEGYQKYGGETMVCGVTGELLYVDVFIGLVYYQRLRHMVSDKFQVRTLGPISNLTHQPVKGRKAGGGIRFGEMERDALIAHGASYLLHDRLHLCSDRHLADVCRNFGTFLSTTRVPATSSDLRGDPTGRDSDRIECMLCKSKESVEKVALPYVFRYLVVELAAMNVKMTMSVR*