ggKbase home page

sw_7_scaffold_2367_16

Organism: SW_7_Viridiplantae_56_9

partial RP 32 / 55 MC: 8 BSCG 16 / 51 MC: 4 ASCG 13 / 38 MC: 3
Location: 12836..14335

Top 3 Functional Annotations

Value Algorithm Source
Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RZU8_RICCO similarity UNIREF
DB: UNIREF100
  • Identity: 26.9
  • Coverage: 305.0
  • Bit_score: 130
  • Evalue 5.30e-27
Uncharacterized protein {ECO:0000313|EnsemblPlants:ONIVA10G16500.1}; TaxID=4536 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Po similarity UNIPROT
DB: UniProtKB
  • Identity: 29.4
  • Coverage: 310.0
  • Bit_score: 133
  • Evalue 8.80e-28
pentatricopeptide repeat-containing protein, putative similarity KEGG
DB: KEGG
  • Identity: 26.9
  • Coverage: 305.0
  • Bit_score: 130
  • Evalue 1.70e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Oryza nivara → Oryza → Poales → commelinids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1500
GTGAGCGCGTGTGCTGGAAGAACAGCAGGTGAGCAGCGCAGGGAGCGAAGAGGCTCCGGGCGCGCGGGTGCGGGCGCTGGGGTTGCGCCGGCGCCAGGGCGCACGGGCAGAGGGCAACAGGAGGAAGCGAAGAAGATATCGCGCGAGCTTGTGCTAGCCGGCGAGGCTTCCGCTGAGCGGGTGCTCACGCAAGCGCGCGTGCCTGTGTGCGCGTATATGCTCAACAGCGTGCTCATTCATACTCGCGAGCTCTCTACCTCCGCCTTTTCTGCTGTCAGCCTCACCCTGGCCCTCCTGCACTGGGCCGAGCACAGCCTGCCTTCGCCCGCGCCCAACGTCGTCTGCTGCACCTCCGCGATCACCACCCTCGGCCGCTTTGGTGACCCAGACTCTGCCCTTTCCGTCTTCGAGCGCATGCTCGCTCGCGGCGTTCAGCCCAACGTCCAGGTGTACACCGCTCTCATCTGGGCCTTCGCTAGCGCCGGCCGCTGCAACGATGTGCTCAGCCTTCGCTCCCGCATGGAAGCCGACGGCATTGGCCCCAACGAACGCACGTACAACGCCCTTATCAGCTGCTGCGCTAAGGCTCGCCGTAAGGTAGAGGCGTGGGACCTGCTACGTCACATGCGTTCCGTTGGTCTCTCCCCCAACGTTCATTGCCTCGTCAGCCTTATTGACGCATGCGCCAAGGCGGGTGACGTCAGCGGCGCATCCGCTGCCTTCGACTTAATCGAAAACAGCGGGTTTTCCATTAATCCCCACGCTGTTGCTGCGCTCGCTAAAGCGTACGCAATATCGCAGGATGCTGGCTCTTTGCAAAAGATGCTCAACCGCATCCAGGCTGATGAGTTGCCTGCGGACACTGCCGCAATGAATGCTATTCTCGATGGCTTTGCTGAGACCGGAAAAGCTTCGCTTGCCGCGCAAGCATTCGGAGCCATGCGATGGCGCGGCATTGAACAGGATTGTATCAGCTTCAACTGCTTGATGCGCGCGCTAATTAAGAAGGATAAGTGTGCCGACGCCCTTGCTGCTTGGGATTTCATGTACAAGCAGGGCGTTAAGTGCAACTCCAAGACGCTGAGTATTGTAATGGCAGCGTGCTTGCGCTCCGGAAGAGGAGCTGAGGCTGAACAAGCGTACATCGCTATGGTCGAAGAGCAAAATGTCCAATCGGACCAACTTGTGCGGGGACAGCTTGTTGCGGCGTTGTGCTTGCAAGGTAGAACAGAGGACGCACTGAGAGAGGCAGAGTTGACAAAGACGTGGTTTGATTTGCGCTCGCGAGATCGGATCGTGCGGGCGTTCGTGAACGCAGACGCGCTCGATTATGCGACTGAGGTGGTGTCGTGGTCGCCGTCAGAAACGTCGCTGGCAGCTCTGCGATGGTTGAGCTCAAAGTTGTGCATGACAAAGCGGCAGCGGGAAGCTGTGGATGTATTGGACGCGGTGCTCAAGGCAGGAGATGGAAGGAGACAGGAGGTGGGGAGCGATGCCGGA
PROTEIN sequence
Length: 500
VSACAGRTAGEQRRERRGSGRAGAGAGVAPAPGRTGRGQQEEAKKISRELVLAGEASAERVLTQARVPVCAYMLNSVLIHTRELSTSAFSAVSLTLALLHWAEHSLPSPAPNVVCCTSAITTLGRFGDPDSALSVFERMLARGVQPNVQVYTALIWAFASAGRCNDVLSLRSRMEADGIGPNERTYNALISCCAKARRKVEAWDLLRHMRSVGLSPNVHCLVSLIDACAKAGDVSGASAAFDLIENSGFSINPHAVAALAKAYAISQDAGSLQKMLNRIQADELPADTAAMNAILDGFAETGKASLAAQAFGAMRWRGIEQDCISFNCLMRALIKKDKCADALAAWDFMYKQGVKCNSKTLSIVMAACLRSGRGAEAEQAYIAMVEEQNVQSDQLVRGQLVAALCLQGRTEDALREAELTKTWFDLRSRDRIVRAFVNADALDYATEVVSWSPSETSLAALRWLSSKLCMTKRQREAVDVLDAVLKAGDGRRQEVGSDAG