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sw_7_scaffold_582_1

Organism: SW_7_Viridiplantae_56_9

partial RP 32 / 55 MC: 8 BSCG 16 / 51 MC: 4 ASCG 13 / 38 MC: 3
Location: comp(3..1901)

Top 3 Functional Annotations

Value Algorithm Source
ATGCN4 n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7LUV2_ARALL similarity UNIREF
DB: UNIREF100
  • Identity: 52.0
  • Coverage: 475.0
  • Bit_score: 437
  • Evalue 2.00e-119
Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400059179}; TaxID=4113 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyl similarity UNIPROT
DB: UniProtKB
  • Identity: 50.1
  • Coverage: 475.0
  • Bit_score: 437
  • Evalue 2.80e-119
ABC transporter, ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 311.0
  • Bit_score: 192
  • Evalue 4.10e-46

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Taxonomy

Solanum tuberosum → Solanum → Solanales → asterids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1899
GTGGCGCTCGAGCATCTCGAGGAGGGCGCTGGTGGTGTTGCTGATGGTGGCGGTCTCGAGGCGGACGCCATGGCGGAAGCAGGCGAACGTGGGAACCTTCATGATGCCGTTGCGACGGGCGGCCTCCTGCAGCTGGCCGACGTCGACGCGAACGAAGCGAACATTGCGGTTCTCGGGGGCTCGGGCCAAGGTGTGCATGAAATCTTTGATTTGCTTGTTCATCTGCTGATTCCTTGCCTGCGCAGAGGGAGTGCGTTGGGCACTACTTTGAGCCAGAGGGTGGGGGGCGCATGGAATCAGAGGGGCATGACGCGTACAATGAAGAACTCAACGAACACGAGGGTGCTCTCGCTGCTTAGCACAAGCTTGCGCCAGTCTTCCTCAGAGGCGACGGTGTGCACACGCCCGCTCAAAGGACGCAATTTCCGTGCTTGTTTGGCGCTCCGAGCCGTCGGTGCCATACCTCAGATTCCGCTGAGTTCCAGCGGATATATACCGCGGAGAGGAATGCCGAAGACAGGAAAGACGCCGGGAAGAGGCCCAGAGCAGAGCAAAGCAGCAGCAACAGCAACGACCACGCTTGACGACTACCTCGGGGTGGCGCTGCCGCCGGAGGAGCCCGACGGCGGAGAGGGCGAAGGAGAGAGTGGGAGCGAAGATGGGAGAGAAGAGGCATTGCAAGAGAATCTACGAGATGGAGTGGGTGGGGTTGACACCGCGCAACGACGGAAGCAGCAGCAGAAGCATGCAAAGAAGGCACAGCTTGCAGCGCAGAAGGAGGCACTTGAGAAGGAGAAAGCTCTGAATGAGTCTCCAGAAGACGCCTACTCCGTCAAGCTTTCCTCCCAACCTGATCCCTCCGCCATCGCCAACGCACGCGACATCAAGGTTGAGGGCTTCAGTGTCGCTGCTCGCGGCAAAGACCTTCTCGTCAATACATCCCTCACCATCTCGCACGGCCATCGCTACGGCCTCGTCGGGCCCAACGGCAAAGGCAAAACCTCCCTTATGAAGCTCCTCGTCTCCAAGCAGCTCCCTGTCCCCGAGTCCATGGATGTACTCATGGTCGAGCAAGAAGTGCACGCCGACAAGCGCTCCGCCCTATCCGCCGTTATTGAGTCCGATGCCGAGCTCGTGCAGCTCCGCAACGAGGAACGTGAGCTCCGCTCTCACCTTGACAAGCTTTCTCTCTACTCCAGCAGCGCTGACGTCGAGCGTGGTCACCACCACGAGCTTGCCGACCATGCCAACGAAGATGATGAAGCCGCCGAGTCCGTCTCTAGCCGACTTGACGAAGTGTATGACCAGCTCGAGCAAAGGGGCAGCTCCCGTGCCGAGGCAAGCGCCGCTCGCATCCTCTCAGGCCTTGGGTTCACGAAGAGCATGCAGCAGCGAACAACCAACACCTTTAGCGGCGGCTGGCGCATGCGCATCAGCTTAGCGAGAGCGCTCTTCATGCAACCTTCGTTGCTGCTCCTTGACGAGCCTACGAACCACCTTGATCTGCGCGCTGTGTTGTGGCTTGAGGAGTACCTTCAGCGGTGGAAAAAGACACTGGTGGTGGTGTCACACGACCGAGACTTTCTGAATACCGTATCCACTGACATTATCCATCTGCACGACCAGAAGCTCGACTTCTACAGAGGCAACTTTGTTCAGTTCGAGCAGATGTACGAGCAGCGGAAGCGTGAGGCAAATAAAAAGTACGAGAAATACGAGAAGCAAATGAAAGAGGCGAAGAAATCAGGCTCGAAGGACAAGCAGAAGAAGGTAGACGAGCGCATAAAGGAGCAGAGCAAGCAAAAGTCGAAAGGGAAGAGCAAGCACCAGACCGACAACGAAGACTCTGCCGGCGCATGGGACGCACCACGAAAGTGGCATGACTATAACGTCAAATTC
PROTEIN sequence
Length: 633
VALEHLEEGAGGVADGGGLEADAMAEAGERGNLHDAVATGGLLQLADVDANEANIAVLGGSGQGVHEIFDLLVHLLIPCLRRGSALGTTLSQRVGGAWNQRGMTRTMKNSTNTRVLSLLSTSLRQSSSEATVCTRPLKGRNFRACLALRAVGAIPQIPLSSSGYIPRRGMPKTGKTPGRGPEQSKAAATATTTLDDYLGVALPPEEPDGGEGEGESGSEDGREEALQENLRDGVGGVDTAQRRKQQQKHAKKAQLAAQKEALEKEKALNESPEDAYSVKLSSQPDPSAIANARDIKVEGFSVAARGKDLLVNTSLTISHGHRYGLVGPNGKGKTSLMKLLVSKQLPVPESMDVLMVEQEVHADKRSALSAVIESDAELVQLRNEERELRSHLDKLSLYSSSADVERGHHHELADHANEDDEAAESVSSRLDEVYDQLEQRGSSRAEASAARILSGLGFTKSMQQRTTNTFSGGWRMRISLARALFMQPSLLLLDEPTNHLDLRAVLWLEEYLQRWKKTLVVVSHDRDFLNTVSTDIIHLHDQKLDFYRGNFVQFEQMYEQRKREANKKYEKYEKQMKEAKKSGSKDKQKKVDERIKEQSKQKSKGKSKHQTDNEDSAGAWDAPRKWHDYNVKF