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sw_7_scaffold_5239_4

Organism: SW_7_Viridiplantae_56_9

partial RP 32 / 55 MC: 8 BSCG 16 / 51 MC: 4 ASCG 13 / 38 MC: 3
Location: comp(1204..2541)

Top 3 Functional Annotations

Value Algorithm Source
Eukaryotic translation initiation factor 3 subunit D n=1 Tax=Populus trichocarpa RepID=U5FV97_POPTR similarity UNIREF
DB: UNIREF100
  • Identity: 36.8
  • Coverage: 451.0
  • Bit_score: 251
  • Evalue 1.80e-63
hypothetical protein; K03251 translation initiation factor 3 subunit D similarity KEGG
DB: KEGG
  • Identity: 37.0
  • Coverage: 451.0
  • Bit_score: 251
  • Evalue 5.80e-64
Eukaryotic translation initiation factor 3 subunit D {ECO:0000256|HAMAP-Rule:MF_03003}; Short=eIF3d {ECO:0000256|HAMAP-Rule:MF_03003};; Eukaryotic translation initiation factor 3 subunit 7 {ECO:000025 similarity UNIPROT
DB: UniProtKB
  • Identity: 36.8
  • Coverage: 451.0
  • Bit_score: 251
  • Evalue 2.60e-63

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Taxonomy

Populus trichocarpa → Populus → Malpighiales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1338
ATGGAGGAGGGGACATGGGGTCCCCCGAGCAAGGAAATTTCAATCGGTTTGAAGGAACTGGGGATTCCGTACGCTCCGTACGCCAAGGCTGACCGGTTCGGCAAGATCGCCGACTGGATCGGGCCCGTCGCACGCCAACAAACGCAGCCCCGCATGCGCCCCAACGCCCTCATCCCCGGGACCGGCCTTGGCACCGGTGCCTCCTCCACCCAACCTGCCGCCACCGCCCGCCCTGGCCAGCCATCCACGGGCGGAGCTGACGACTCCGACCAACCCGACTCCGAGTATACCTTCGTTGACACCCGGCCTGCTCCCCGCACGAAGGGCTGGCAGCAGCGCGGCGCCGGCCGCGCCCAGAGCGGCCGCTTTCCTCCCGGTTCTTCCGGCCGTAGCCAGCAAGGTCCTCAACCCCAGAGTGGCGCCGCTGCTGTTGCTGCTACTGGCGCATGGGGCTCTGGCCCGCCTGGCCAGCGCGGTGCCGGCGGTGGTGCCGGCCGCGGCGACGGTCGTGGGCGCGGGCAACAGCAACAGCAAGGTGGCCGCGGCTTTCAGGGTGACCGCCGTGAAAATGCGGTGCAATACTCGCCAAGCGTCGAGGTCCGGCCAGAGTGGAACGTGCTCGAGCAGGTGCAGCTTTCGCAGCTCACAAAGCTCAGCTACGACGTGAAGGAAGCTGAGGACCTTAAAACGTGCGGCAGGTTGCGCAAGTACAACAAGGTGCTCGACCGTATCACTCCCCGCGCTGAGAGGCGTCTTCAGCGCTTTCAAGGCGTTGAATTTCCAAACCCCACCGCGTCAGACGATCCTTATCTGCAGGAATTATCTGACCTCGATGAGGGCAGTGTGTTCATTACTGACAGCGTGCTTGCGGCCATCATGTGCGCTACGCGCTCCGTTTTCTCTTGGGACATTGTCATCACCAAAAGCGGGAGCAAGCTCTGGTTCGACAAGCGCCGTAAAAGCAAATTTGAACAATTGACCGTGCATGAGACGGCGCAGTTGGGCTCGCAGCTCGAGGAGGGCTATGATTCCATCAACCGCGTGCAGCCGTTATGCGAGGAAGCAACCATCACCAATGCGAATTTTTCCCAGATGGCACTGGACGAAAATTCGCCCGTGCAGGAGCTTGAAGACGAGGCACCATTCATTGATGCCTCCAAACGTGACAACACTGCGCCCAAGGCGTACCGCTACCGAAGATGGAAGCTCGAGGAGGGCGTAAGCGTTGTTGTGCGAACAGAGATTGATTGTCTGTGTGAGTTGCGAGGAGAGGATGTCTATTCGCTTGCAAAATCAGTGAACGAGTTTGATCCAAGGGTGCGTACCATAATCTTTTAG
PROTEIN sequence
Length: 446
MEEGTWGPPSKEISIGLKELGIPYAPYAKADRFGKIADWIGPVARQQTQPRMRPNALIPGTGLGTGASSTQPAATARPGQPSTGGADDSDQPDSEYTFVDTRPAPRTKGWQQRGAGRAQSGRFPPGSSGRSQQGPQPQSGAAAVAATGAWGSGPPGQRGAGGGAGRGDGRGRGQQQQQGGRGFQGDRRENAVQYSPSVEVRPEWNVLEQVQLSQLTKLSYDVKEAEDLKTCGRLRKYNKVLDRITPRAERRLQRFQGVEFPNPTASDDPYLQELSDLDEGSVFITDSVLAAIMCATRSVFSWDIVITKSGSKLWFDKRRKSKFEQLTVHETAQLGSQLEEGYDSINRVQPLCEEATITNANFSQMALDENSPVQELEDEAPFIDASKRDNTAPKAYRYRRWKLEEGVSVVVRTEIDCLCELRGEDVYSLAKSVNEFDPRVRTIIF*