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sw_7_scaffold_6040_2

Organism: SW_7_Viridiplantae_56_9

partial RP 32 / 55 MC: 8 BSCG 16 / 51 MC: 4 ASCG 13 / 38 MC: 3
Location: 1978..2337

Top 3 Functional Annotations

Value Algorithm Source
40S ribosomal protein S12 n=2 Tax=Oryza RepID=I1Q973_ORYGL similarity UNIREF
DB: UNIREF100
  • Identity: 61.9
  • Coverage: 118.0
  • Bit_score: 156
  • Evalue 1.30e-35
40S ribosomal protein S12 {ECO:0000256|RuleBase:RU000670}; TaxID=39947 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poa similarity UNIPROT
DB: UniProtKB
  • Identity: 61.9
  • Coverage: 118.0
  • Bit_score: 156
  • Evalue 1.80e-35
LSU ribosomal protein L7Ae similarity KEGG
DB: KEGG
  • Identity: 33.7
  • Coverage: 104.0
  • Bit_score: 60
  • Evalue 3.50e-07

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Taxonomy

Oryza sativa → Oryza → Poales → commelinids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 360
ATGACAGCGCTGCAGCAGATCCTGAAAGACTCACTGGCGAGCGACGGCTTGGCACGGGGACTGAAGGAGGTGACGCAGGCAATTGAGAAGAGGAACGCGCAGCTCTGCGTGCTTGCTCAGGACTGCGACCAGCCCGACTACATCAAGCTCATCAAGGCGCTTTGCAATGAGGCGAATGTGCAGCTCATTAGCGTGCCGAAGGCGAAGCAGCTTGGTGAGTGGGTTGGTCTCTGCAAGCTGGACGAGGAGGGCAACGCCCGCAAGGTCGTCGCTTGCTCCTCCGCCGTTGTGAAGGACCTTGGCGAGGGTGACTCCGAGGCGCTTAGCGTTATCCGCAACAGCATCTCCGCCAACAGCTGA
PROTEIN sequence
Length: 120
MTALQQILKDSLASDGLARGLKEVTQAIEKRNAQLCVLAQDCDQPDYIKLIKALCNEANVQLISVPKAKQLGEWVGLCKLDEEGNARKVVACSSAVVKDLGEGDSEALSVIRNSISANS*