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sw_7_scaffold_6001_2

Organism: SW_7_Viridiplantae_56_9

partial RP 32 / 55 MC: 8 BSCG 16 / 51 MC: 4 ASCG 13 / 38 MC: 3
Location: 602..4696

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=71139 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Sperma similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 999.99
  • Bit_score: 1462
  • Evalue 0.0
DNA-directed RNA polymerase, subunit A' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 887.0
  • Bit_score: 627
  • Evalue 1.10e-176
DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor RepID=C5YGY9_SORBI similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 999.99
  • Bit_score: 1461
  • Evalue 0.0

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Taxonomy

Eucalyptus grandis → Eucalyptus → Myrtales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 4095
ATGTCGGCGACGCAGGAGCTGAAGCAATCAACGGCGGAGTACAAGGGGGTGTTTGGTTTGCAGTTCGGAGTGCTCTCGCCCGACGACATCCGCAACTACTCCGTCGCTGAGATTACCTCCGCCGCAACGTACGAGGGCAATGAGGCTGTGCACGGCGGTCTCTCCGACCCGCGCCTTGGCGCCGAGCGCGGCAGCACAACTCTCTGTAAGACGGATGAGATGGACTACAAGAACAACCCTGGCTACTTCGGTCATCTTGTGCTTGAAAAGCCTGTGTTCCATCTCAGCTTCCTTGACATTATCGTCCGCATCCTCCGCTGCGTTTCATTCTCCACTGGTAAGCTTCTCATCAACAAAGACGACCCCAAGTACGCGTATATCCGTCGCATCCAGCGCCCTCAGAAGCGCCTCAAAAGCGTCATGGAGCTCTGTAAGACCAAGAGCCGTGACGATGAGACCGGCGCCCTGCAACCCTCCTTTAAGATCGAGCAGCGCTCCAAGCTCGTTGCCGAGTTCCCTGTCGCGAAAGAGGAGGACATCAATGCTATCCCTGACACGGGTGAGCGCAAGCAAACCCTCACTGCCGAGCGCGCCCTCAACGTGCTCAAGCTCATCAGCGACGAGGACGCCGAATTCATTGGCCTCAACCCCAAGTTCTGCCGTCCCGACTGGCTACTCATTACCGTCCTCCCCATTCCGCCCCCGCATGTACGCCCATCAATTCTGACTGGAGGCGGCATGCGCAGCGAAGACGATCTCACTGGAAAACTGATGGAAATTGTGCGGACCAACAAGACTCTCCGCCATCGCGTTTCTGAGGGCGCTCCGCAGCACGTTGTAAACGAGACAGTTGACCTACTACAGTATCACATCACCACGTACTTCGACAACACCTTTGCGGGCATTCCTCGAGCAACGCTGCGCTCCGGGAGGCTGGTAAAGTCCATCAGCGAGCGGCTAAAGGGAAAGGAGGGCAGGATTCGGGGCAACCTAATGGGAAAGCGAGTCGACTTTTCCGCACGAAGCGTCATCACACCAGACAGCAACCTTGACCTCGACGAGCTTGGCGTGCCGCGAAGCATCGCCTTAACAATGACATTTCCGGAGACGGTTACACCGTACAACAAACACCGCTTGCAAGAGCTGGTGTACAATGGGCCTCATCCGCCAGAGGGCCAGACTGGTGCAAAAAACATCATCCGGGAAGACGGCTCCCGCGTTGACCTGCGCTTTTTACGTAATGACGAGAAGCAGCTTGAGTATGGTTTCAAAGTGGAGCGACACATGCAGAACGGCGAGATTGTGTTGTTCAATCGGCAGCCCTCGCTGCACAAGATGAGCATGATGGGTCACAGGGTGCGCATTCTGCCGTACTCCACCTTCAGGCTCAACCTTAGCGTCACTCCGCCGTACAACGCCGACTTTGATGGTGACGAGATGAACATGCATTTGCCACAGACACACGAAACAAAGGCTGAAGTCAAGGAGCTCATGATGGTGCCAAAAATGATTATCTCACCTCAGGCAAACAAGCCGGTAATGAGCATCATTCAAGACACGCTGCTTGGGTGTCGGCTCCTGACAAAGCGCGACACTTTCTTAGACAAGGGTGAGCTGATGAATCTTCTCATGTGGCTCAAGAATTGGGATGGTGGCATTCCAACTCCCGCCATTGTGAAGCCGAAGCCGCTTTGGACTGGCAAGCAGATCTTTGACCTGATCCTTCCCGACATCAACATCCGCAACCGAAAAGCTGGCTGGCACGATGACATTCACGACAAGAACAACATCTTCAGCTTTGGTGACACCGTTGTGCAGATTGAGCGCGGTCGGCTTGTTTCTGGAACGCTGTGCAAGAAGAGCCTCGGTTCTGGTGGCCAAGGCTTGATTCATACTATCTGGCTAGAGCATGGGCCAAACACCGCACGAGATTTCTTGACGCAAACGCAGAGTCTTGTAAATCAGTGGCTGCAGCAGCATGGGTTCTCAATAGGCATCGGTGACACCTTAGCCGATGACGAGTCGATGCAGAATATCCGTGACTATATTGCAAAAGGCGTCGAAGACGTGGATGACCTAATCAGGCAGTGGCGTCAGAAGCAACTTGAGCCGCTCCCTGGGCACACGATGATGGTCACCGCCGGCTCAAAGGGCTCGTACATCAACGTCAATCAGGTGATTGCGTGTGTGGGCCAGCAAAGTATCGAGGGCAAGCGCATCGGTTTTGGCTTCGAAGATCGCACTTTGCCACACTTCACCAAAAACGATTACGGCCCGTCTTGCAGAGGCTTTGTCCAGAACTCATACCTGCGGGGCCTTGCTCCAACGGAGATGTATTTCCACGCGATGGGTGGTCGCGAAGGCTTAATTGACACAGCTGTGAAGACAGCAGAGACTGGATACATTCAGCGTCGGCTTGTGAAGGCATTGGAAGACTTGGCTGTCCAGTATGATGGAACTGTACGAAACAGTGTCGGTGAGGTTGTGCAGTTCCTCTATGGAGAGGACGGGATGTCTGGTGAGCGGATCGAAGCTCAGCACCTCGACAGCCTTCGCCTGTCCGATGACGATTTCCAACGACGCTTCTACCTGGACACCAGGAGCTTTGAGGATCTTGTGCGGAGCCTTGGCAGCACTGAGGTTGCTGAACGAGTGATGAATAGGCCCGAGGATCTATACGTGCTTGCGCAAGAGTACAGCCAGCTCCAGGCTGACAGAGAGACACTGCGAACGCTCGTGCCCGGCCCATCGAACGGACAGCCGGAGGGAAATCTCCCAGTCAACATGACGCGGATACTACACAACGCTCTTAAGAAGTTCCGTGACGCGGGAAGGCAAAAAGGCGAGCTGAATCCTGTCGAAGTATGCCGAAAAGTTGAGAATTTGCTCGACAACCTCAAGTCGGCGGTGGTTCCTGGCAAAGGATCTATTTCGAAGGAGGCACAAGAGAACGCCACGATGCTCTTTTGCATTTTGGTCCGCTCGACGCTAGCATCAAAGCGAGTCATCTCCGAGTACATGCTCACTCAAGAGGCATTCGACTGGATGCTCGGCGAGATTGAAACGCGCTTCAAGCAGTCGCTTGCGACACCGGGCGACGCAATTGGTTGCGTGGCTGCGCAATCGATCGGAGAGCCAGCGACGCAAATGACGCTCAATACTTTCCATTTCGCTGGTGTGTCAGAGAAGGATGTAACACAAGGCGTGCCGCGATTGAAGGAGGTCATCAACATTGCTAAGAACATTCAGACGCCAAGCTTAGAAGTATATCTTCGTGACGTATGGGAGTGTGATAAGGATAGAGCGAAAGATGTGCAAGCGGAGGTGGAGTACACGACATTGCAGAGCGTCACTGAGCGCACAGAGATCTACTACGACCCGGATCCAAGAAATACCGTGGTTGAGGAGGACAGAACATTTGTGCAGACATACTTTGACGTGCCAGACGAAGACGTCGATCCGGACAAGCTCTCGCCATGGCTTATTCGCATTGTGTTAAATAGAGAGATGATGGTTGACAAGCAGCTGTCCACTGAAGAAGTTGCGGACCGTGTGAACGAGGAGTTTAAGGATATGGTGAAGTGCATATGCACGAACGACAACGCGGAGACTCTAGTATTGCACGTAAGAATGCTTAAAAACGAGCAGGACCAGCAGATGGAAAAGCAGGAGGATGATGACGAAGAGGAGGAGGACCCTGGAGAAGCCGATGTGAGAATGCAGCGCCTCGTGGAGAGCAGACTTCTGACTGATGTCAAGCTTCGAGGGATTCGAAGTATCAAGAAAGTATACATCCGGGAGCAAACTCGGCATGAGATTGATTCTCGCACCGGAGCGTACAGGGAGACAAAGAAGTACTTGCTGGACACGGATGGCTCTAATTTGAAGAATGTGATGTGCAAGCCACAAGTTGACGAAACGCGAACATACACAAACCATTTGGTGGAGCTCTTCCAAGTGTTGGGCATCGAGGCTGCTCGAAGCGCGTTGATGTATGAGCTTCGCGGCGTGATACAGACAGGTGGCTCGTATGTTAATTATCGACACTTGGCGATCCTGTGTGAGGTCATGACCGCAAAAGGCCACTTAGGATAA
PROTEIN sequence
Length: 1365
MSATQELKQSTAEYKGVFGLQFGVLSPDDIRNYSVAEITSAATYEGNEAVHGGLSDPRLGAERGSTTLCKTDEMDYKNNPGYFGHLVLEKPVFHLSFLDIIVRILRCVSFSTGKLLINKDDPKYAYIRRIQRPQKRLKSVMELCKTKSRDDETGALQPSFKIEQRSKLVAEFPVAKEEDINAIPDTGERKQTLTAERALNVLKLISDEDAEFIGLNPKFCRPDWLLITVLPIPPPHVRPSILTGGGMRSEDDLTGKLMEIVRTNKTLRHRVSEGAPQHVVNETVDLLQYHITTYFDNTFAGIPRATLRSGRLVKSISERLKGKEGRIRGNLMGKRVDFSARSVITPDSNLDLDELGVPRSIALTMTFPETVTPYNKHRLQELVYNGPHPPEGQTGAKNIIREDGSRVDLRFLRNDEKQLEYGFKVERHMQNGEIVLFNRQPSLHKMSMMGHRVRILPYSTFRLNLSVTPPYNADFDGDEMNMHLPQTHETKAEVKELMMVPKMIISPQANKPVMSIIQDTLLGCRLLTKRDTFLDKGELMNLLMWLKNWDGGIPTPAIVKPKPLWTGKQIFDLILPDINIRNRKAGWHDDIHDKNNIFSFGDTVVQIERGRLVSGTLCKKSLGSGGQGLIHTIWLEHGPNTARDFLTQTQSLVNQWLQQHGFSIGIGDTLADDESMQNIRDYIAKGVEDVDDLIRQWRQKQLEPLPGHTMMVTAGSKGSYINVNQVIACVGQQSIEGKRIGFGFEDRTLPHFTKNDYGPSCRGFVQNSYLRGLAPTEMYFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDLAVQYDGTVRNSVGEVVQFLYGEDGMSGERIEAQHLDSLRLSDDDFQRRFYLDTRSFEDLVRSLGSTEVAERVMNRPEDLYVLAQEYSQLQADRETLRTLVPGPSNGQPEGNLPVNMTRILHNALKKFRDAGRQKGELNPVEVCRKVENLLDNLKSAVVPGKGSISKEAQENATMLFCILVRSTLASKRVISEYMLTQEAFDWMLGEIETRFKQSLATPGDAIGCVAAQSIGEPATQMTLNTFHFAGVSEKDVTQGVPRLKEVINIAKNIQTPSLEVYLRDVWECDKDRAKDVQAEVEYTTLQSVTERTEIYYDPDPRNTVVEEDRTFVQTYFDVPDEDVDPDKLSPWLIRIVLNREMMVDKQLSTEEVADRVNEEFKDMVKCICTNDNAETLVLHVRMLKNEQDQQMEKQEDDDEEEEDPGEADVRMQRLVESRLLTDVKLRGIRSIKKVYIREQTRHEIDSRTGAYRETKKYLLDTDGSNLKNVMCKPQVDETRTYTNHLVELFQVLGIEAARSALMYELRGVIQTGGSYVNYRHLAILCEVMTAKGHLG*