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sw_8_scaffold_634_4

Organism: SW_8_Viridiplantae_55_9

partial RP 28 / 55 MC: 12 BSCG 18 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: comp(4457..5482)

Top 3 Functional Annotations

Value Algorithm Source
Zinc finger family protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7KQ85_ARALL similarity UNIREF
DB: UNIREF100
  • Identity: 45.6
  • Coverage: 287.0
  • Bit_score: 245
  • Evalue 7.70e-62
Coffea canephora DH200=94 genomic scaffold, scaffold_47 {ECO:0000313|EMBL:CDP10759.1}; TaxID=49390 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnolioph similarity UNIPROT
DB: UniProtKB
  • Identity: 41.9
  • Coverage: 332.0
  • Bit_score: 247
  • Evalue 2.20e-62
zinc finger family protein; K13127 RING finger protein 113A similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 287.0
  • Bit_score: 245
  • Evalue 2.40e-62

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Taxonomy

Coffea canephora → Coffea → Gentianales → asterids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1026
ATGGCATTCGCGTCGAGGCGGAAGAGACCAGGGCAGGGCAGAGGGAGGGAGGCAGCAGCTACAGTGGGAGGAGGCGATGAGGATGATGAAGACGAGGAGCTGGAGATCTCAAATGAAGCCAATGAAAGCTCCAATGCAGAGAGAGGCTGGCGGAAGCGCTTCGCTGAAGAAGGAAGCGAGCGTCACAGAGGGAGAAACGATGCACTAGCAACCAGCGAATTTCAACAAGACACTCCGCGCTCGCAGGATGCCCGTGCACTCCGTGAGGCCGCCTTAAAAAGGGCTGCCTCAGGGCAGGACCGGGCGGATGATGGCGTTTACAAAGGCATGAACGGATATGTTGACTGGACTGCAGGGTTTCGAAGGGAGCAGACTCTCTCCTGCGATGCAAAAGCATCGGTAGGACCCCAGCGTGCGCCTTCGAATGTGCGTCGCTCATATGAGATTGACTATAACCCACCCATATGCAAAGACTTCAAGGAGACGGGATTTTGTGGCTATGGCGACAGCTGTAAATTCGCGCACATGCGTGAAGATTACAAGTCCGGCTGGCAGCTTGAGAACGACTGGGAGGAGCGCCAAAAGGCGAAGCAGCGTGAGCAGATGAAGGCTGCACAGCGTGCTGCCAAAGTTGCTTCCGGAGAAGCTGTCGATGACGAGGATGTTGCTGACAAGAACGACGACGATGAGTCCAAGGTGAAAGGGCCTATGTTCAATGGCCTGCCGTTTGCATGCTACATATGCCGCAAGTCCTTCATGGAGGTGCGCGATCCCGTGGTCACCAGGTGCAAGCACTACTTCTGCGAGGAGTGCGCCCTTCGACGGTTCCAAACCGACCGCACTTGCGCTGCGTGCGGAACGCACACGCAAGGTGTCTTCAATGCTGCCACCGATATCATCAACGAGGTGAAGAAGCGTAAACGCGAGGAGAGCGAGCATCGGACATCTGATGGTTCCAAGGTTTCTCGCACAGTGGCAGAATCAAGTGGCACTCGCTCCGTTCAGCAGGGCTGGACGCTTGGATGA
PROTEIN sequence
Length: 342
MAFASRRKRPGQGRGREAAATVGGGDEDDEDEELEISNEANESSNAERGWRKRFAEEGSERHRGRNDALATSEFQQDTPRSQDARALREAALKRAASGQDRADDGVYKGMNGYVDWTAGFRREQTLSCDAKASVGPQRAPSNVRRSYEIDYNPPICKDFKETGFCGYGDSCKFAHMREDYKSGWQLENDWEERQKAKQREQMKAAQRAAKVASGEAVDDEDVADKNDDDESKVKGPMFNGLPFACYICRKSFMEVRDPVVTRCKHYFCEECALRRFQTDRTCAACGTHTQGVFNAATDIINEVKKRKREESEHRTSDGSKVSRTVAESSGTRSVQQGWTLG*