ggKbase home page

qh_1_scaffold_12935_2

Organism: QH_1_Viridiplantae_55_6

partial RP 22 / 55 MC: 6 BSCG 14 / 51 MC: 3 ASCG 11 / 38 MC: 4
Location: comp(537..2939)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Capsella rubella RepID=R0GLY9_9BRAS similarity UNIREF
DB: UNIREF100
  • Identity: 24.6
  • Coverage: 382.0
  • Bit_score: 95
  • Evalue 3.00e-16
Uncharacterized protein {ECO:0000313|EMBL:EOA17894.1}; TaxID=81985 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; similarity UNIPROT
DB: UniProtKB
  • Identity: 24.6
  • Coverage: 382.0
  • Bit_score: 95
  • Evalue 4.30e-16
uncharacterized LOC101758191 similarity KEGG
DB: KEGG
  • Identity: 30.5
  • Coverage: 203.0
  • Bit_score: 90
  • Evalue 3.10e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Capsella rubella → Capsella → Brassicales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 2403
CAGACATTAGTTACCTTCCGCTACAAGTTCGTTGAAGAGCTGCAACTATACATGGGTATGCTGACTGAAGACGTGGAGCAGGGTGAACAGGAAGAAAGCCATGCTGCAGGTGAGCGAGACAAGCCACAGCAGGATCAAAAGAAACAGCAAGGCAACACGCAGCAGCAGCAAGAGGCTTTGGGGTTAAAGCTTGACGTGGTCTTTGAGGCCCCATACATCATCATTCCACGCACAACGGGAAGCAGTGAGGCACTTGAGATTGACTTTGGCCATCTCAAGCTTGAGTCCATGATTGACGATGGGCATTTCGAACAATCCAGAGTTGAAGTGACCGATGTCAGCATGACTGAGCTGGCTCTATGGGTGAGAACAAGCTCGACAAGGAGCAAGCTGAATGCGCCGAATAGCAGCATTTTGACACAGCTGCAACGCACACTGACACAGACGGAAGAGAGACTCCCTGCGATTTCGGTGGATCTCAGGATACCGGAGCTTGCATTGCAACTTACAAGCTCACAGTTTGATTTACTCAAGTCTTGCGCAACGGAAAATATGAGTGAATCTCCACGCTTGCCTGGGAGGAATGCAAGATCCACCCAGCGAGAGAGTGGCACTGATAAGAACCGTGAGCTTGGGCAGCGCAATGACAAGGACATACCATTAGCCTGGGTGCAGGCAAGCATTCCGCTTGCACGAATATCCATCTTGCAACAAATAAGGGGAACACCAACTTCCCTGGCTGTGCTTGAACTCCGGGATCTGGTCGCCACAGTGCGAACAAATGACGATGGAGACTTGGCCATCCGTGCTAATCTCCCACGTTTCGAGCTTACTGATGCACGTGAGGGCGTTAAAACGGCTGGGGAGAAAATCATGAAATGCGGTATATTGAACAATGACAGCAGGCAGGACTTCTTATCAATGGCTTACACAAATCAGAAGCCCGGTTTGGCTGCTGAAACGAGGTCCATTGTGCCAAACATCACCGAAGTGAATGCAAATGTAAATGAACCAGGCCTGACGCTCGAAACGGACTTTGTACTCAGCGTTGCTCGCTTCTTCGTTCCGGGGCTTGCTGTTGGTGAGGATATCACAGGAGACGATATCCTGCCAAATGACATTTTCCTCTCAGAGAAAACAAAGCTCCCCGAGTCCCCCTTAGAGCTCAGCACTAGGCGCAGGCTTCTTGGTGACGCGTTTTGCTCCTCAACTGTGGAGCTCGATGGTCAGGGCGGAACGGTCGTGTTACCGAGTGAGGACAAGCAGCCAGTGATCCTCCTTGATTCTGGTCAACACCTCCTGTTCCGTAATTTGACAATTCAGAACTCTGAGCGGCTAGCGTCTGCGATATCCTTGCCGCCAGGAGCGTCTTACTCTGTCGAGAGCGACGATGGAGTAGTGCTACAATTCCGTGATGCGACTGCACTGGACAATGAAGGAACTGAACTGGTTGCAACAAAGATCATGGACTCCTCGCAAGAGCAGAAAAGGGTGCATTTCGGCATACTATCAAGCTTTCGAGCTCGTATGGAGCAGGTTCCTTCAGGTGGCAAAACTATTGAGGCAGGTGTTACAGGCTTGCGCATTGACCAGTACCAGTCCTACGAGTACAGGCAGAAGGATTATCTTAAGATCTTATCACCTTGCAGCGTTGACTGCAAGCTCGCACAAAGTGCCTCGGGATGGACCGACGTTGAGATAGTGATGAGCTGCATTCAAGCGCAATTTTCGGTCTCAACTGTCCAATTCATTCAGAGCGTTGCCTCTGATGCGGTTGTTCCAATTGTTGCTCGATCTCCGTTAGCCTTGGCAACGCGATTCAAAAAAATCTGGTCAGGTGACGGTGCAGACACAATTCGCGAGGAAGAGCACAATGTGAGCTTCTGGAATCCAATACCGCCCCCGGGCTATGCTCTTCTTGGTTCAACGGCGACCCATGGATCTCACCCGCCTGAAAAGGCCTTGATGGTTATACGGGATATCTCTGCTTTGTGCTCTCCGCCACTTTCGTATCGCCCGATCTGGAGTGACCGGTCTGGCAGTGTAACTGTATGGTGGCCTAAAGCTCCTGACGGATACAGAGTTCTTGGCTCCCTCGCATGTCGCGGACAAGATGAGCCATCTAAGTCAGCGACTCGCTGCGTGAGGCATGAGCTCGTGCGTAGCTGCCATGATTGGGAGACCTTGGGCAAGACAGGTCTTATGTTCTGCTACAATCGAGTGCAATCTATTGTTCCGCAAGAAAGTCTTGACGATGAGCCAGGAATGCAAAGAGTTGATCTTCGTGCTCCACATGGAATTTCACTGAGCGGCGCAAGCGAGCCGGAGACTGAGGGTGCCACTGAGCCTTCAATGCAAACAGTACGTACCCTTGCAAATAATTCTGCGATGTTTGCATCGTAA
PROTEIN sequence
Length: 801
QTLVTFRYKFVEELQLYMGMLTEDVEQGEQEESHAAGERDKPQQDQKKQQGNTQQQQEALGLKLDVVFEAPYIIIPRTTGSSEALEIDFGHLKLESMIDDGHFEQSRVEVTDVSMTELALWVRTSSTRSKLNAPNSSILTQLQRTLTQTEERLPAISVDLRIPELALQLTSSQFDLLKSCATENMSESPRLPGRNARSTQRESGTDKNRELGQRNDKDIPLAWVQASIPLARISILQQIRGTPTSLAVLELRDLVATVRTNDDGDLAIRANLPRFELTDAREGVKTAGEKIMKCGILNNDSRQDFLSMAYTNQKPGLAAETRSIVPNITEVNANVNEPGLTLETDFVLSVARFFVPGLAVGEDITGDDILPNDIFLSEKTKLPESPLELSTRRRLLGDAFCSSTVELDGQGGTVVLPSEDKQPVILLDSGQHLLFRNLTIQNSERLASAISLPPGASYSVESDDGVVLQFRDATALDNEGTELVATKIMDSSQEQKRVHFGILSSFRARMEQVPSGGKTIEAGVTGLRIDQYQSYEYRQKDYLKILSPCSVDCKLAQSASGWTDVEIVMSCIQAQFSVSTVQFIQSVASDAVVPIVARSPLALATRFKKIWSGDGADTIREEEHNVSFWNPIPPPGYALLGSTATHGSHPPEKALMVIRDISALCSPPLSYRPIWSDRSGSVTVWWPKAPDGYRVLGSLACRGQDEPSKSATRCVRHELVRSCHDWETLGKTGLMFCYNRVQSIVPQESLDDEPGMQRVDLRAPHGISLSGASEPETEGATEPSMQTVRTLANNSAMFAS*